RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LMLNQ96KR4 655 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 MFRPQ9BY79 579 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 PDCL3Q9H2J4 239 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 FAM204AQ9H8W3 233 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CAPN10Q9HC96 672 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 LMBRD1Q9NUN5 540 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.94□□□□□ -0.82
MSH5-218ENST00000494646 USP36Q9P275 1121 aaKnown RBP9.94□□□□□ -0.82
MSH5-218ENST00000494646 SUN2Q9UH99 717 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 SLC12A6Q9UHW9 1150 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 FRYQ5TBA9 3013 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 CACNA1EQ15878 2313 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
MSH5-218ENST00000494646 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 MAP1BP46821 2468 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 SPEGQ15772 3267 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 METTL12A8MUP2 240 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 MEI4A8MW99 385 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 KCNU1A8MYU2 1149 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 OPHN1O60890 802 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 SIN3BO75182 1162 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ERBB2P04626 1255 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 SYPP08247 313 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 CEACAM1P13688 526 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 GNSP15586 552 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 SPINK2P20155 84 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ERCC5P28715 1186 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 PMLP29590 882 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ST8SIA6P61647 398 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 RPS14P62263 151 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 ZNF252P-AS1Q0IIN9 211 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 FOXC1Q12948 553 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 NME3Q13232 169 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 NNTQ13423 1086 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 RAPGEF1Q13905 1077 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 KCNJ12Q14500 433 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 DRAP1Q14919 205 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 MEA1Q16626 185 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 EFHC1Q5JVL4 640 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 TAF3Q5VWG9 929 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 DPY19L2P1Q6NXN4 242 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 BEND5Q7L4P6 421 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 CIR1Q86X95 450 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 DHX40Q8IX18 779 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 HDDC3Q8N4P3 179 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ZCCHC9Q8N567 271 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 GANCQ8TET4 914 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 DNASE2BQ8WZ79 361 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 MYO19Q96H55 970 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 RPL10LQ96L21 214 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 VPS16Q9H269 839 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 LHX5Q9H2C1 402 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 C6orf106Q9H6K1 298 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 SYNCQ9H7C4 482 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 DDIT4Q9NX09 232 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 KIAA1522Q9P206 1035 aaPredicted RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 EIF2B4Q9UI10 523 aaKnown RBP9.93□□□□□ -0.82
MSH5-218ENST00000494646 DACH1Q9UI36 760 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 SLCO3A1Q9UIG8 710 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ANGPTL2Q9UKU9 493 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 ERVW-1Q9UQF0 538 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 CEP83Q9Y592 693 aa9.93□□□□□ -0.82
MSH5-218ENST00000494646 SPAARA0A1B0GVQ0 90 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 TTC34A8MYJ7 566 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 F5H5T6 163 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 LUC7L3O95232 432 aaKnown RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 IGLV3-25P01717 112 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 DNTTP04053 509 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 CSRP1P21291 193 aaKnown RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 HOXD12P35452 270 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 GGCXP38435 758 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 ANP32AP39687 249 aaKnown RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 SLC6A3Q01959 620 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SEMA3BQ13214 749 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 EIF4EBP2Q13542 120 aaPredicted RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 CDH18Q13634 790 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 PTPN20Q4JDL3 420 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 C2CD6Q53TS8 623 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 TCP11X2Q5H9J9 407 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 PITRM1Q5JRX3 1037 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 KLHDC7AQ5VTJ3 777 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 C11orf57Q6ZUT1 292 aaPredicted RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 C14orf80Q86SX3 495 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 FAM71AQ8IYT1 594 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SPDYE1Q8NFV5 336 aaPredicted RBP9.92□□□□□ -0.82
MSH5-218ENST00000494646 CADM4Q8NFZ8 388 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SNX19Q92543 992 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 IGSF8Q969P0 613 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 BTN2A3PQ96KV6 586 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 MRGPRX3Q96LB0 322 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 CAMK1GQ96NX5 476 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 NOX5Q96PH1 765 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SLC2A13Q96QE2 648 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 TRIM62Q9BVG3 475 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SIK2Q9H0K1 926 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 SLC32A1Q9H598 525 aa9.92□□□□□ -0.82
MSH5-218ENST00000494646 TAB2Q9NYJ8 693 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms