RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 SYT5O00445 386 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 PRYO14603 147 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 RPP40O75818 363 aaKnown RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 SGPL1O95470 568 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 NTN1O95631 604 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 HSP90AA1P07900 732 aaKnown RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 SNHG28P0DPA3 235 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 AKR1A1P14550 325 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 HOXA7P31268 230 aaPredicted RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 IDUAP35475 653 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 SERPINF1P36955 418 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 AGTR2P50052 363 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 ZNF84P51523 738 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 MTX1Q13505 466 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 TFAP2DQ7Z6R9 452 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 TRABD2AQ86V40 505 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 LAS2Q8IYD9 372 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 MMP21Q8N119 569 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 ANKRD42Q8N9B4 389 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 ATG16L2Q8NAA4 619 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 OR1N1Q8NGS0 311 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 CELF1Q92879 486 aaKnown RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 MCRS1Q96EZ8 462 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 FAR2Q96K12 515 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 KATNAL1Q9BW62 490 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 SCNM1Q9BWG6 230 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 TMX4Q9H1E5 349 aaPredicted RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 EBF3Q9H4W6 596 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 LUZP4Q9P127 313 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 NFU1Q9UMS0 254 aa3.63□□□□□ -1.83
CLHC1-213ENST00000494539 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.63□□□□□ -1.83
CLHC1-213ENST00000494539 LOC105369274A0A096LPK9 316 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 LOC102723532A0A0G2JNH3 316 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 H3BNX3 289 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 TRIM38O00635 465 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 NKX2-8O15522 239 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 CSTBP04080 98 aaKnown RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ENO1P06733 434 aaKnown RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ITGA2BP08514 1039 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 PSG1P11464 419 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ST6GAL1P15907 406 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 AKT1P31749 480 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 STAT6P42226 847 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 POLE2P56282 527 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 BLMHQ13867 455 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 TRIM14Q14142 442 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 AAK1Q2M2I8 961 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 TRIM60Q495X7 471 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ALFQ53S48 1182 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 CCDC70Q6NSX1 233 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ZNF517Q6ZMY9 492 aaPredicted RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 RFX6Q8HWS3 928 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 SMAP1Q8IYB5 467 aaPredicted RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 OR4N4Q8N0Y3 316 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 CPXCR1Q8N123 301 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 SLC44A5Q8NCS7 719 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 NLRP4Q96MN2 994 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 RMDN3Q96TC7 470 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 HERPUD2Q9BSE4 406 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 HTATIP2Q9BUP3 242 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 GATA5Q9BWX5 397 aaPredicted RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 ZHX3Q9H4I2 956 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 LRFN1Q9P244 771 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 HERC5Q9UII4 1024 aaKnown RBP3.62□□□□□ -1.83
CLHC1-213ENST00000494539 GTF2A1LQ9UNN4 478 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 SQORQ9Y6N5 450 aa3.62□□□□□ -1.83
CLHC1-213ENST00000494539 A0A0U1RQG5 324 aaPredicted RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A18PA6NE21 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A16PA6NEW6 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A9PA6NNJ1 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A5PA8MXJ8 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 KIF28PB7ZC32 967 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 M0QYT0 321 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 ACKR2O00590 384 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 PRPF4O43172 522 aaKnown RBP eCLIP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 TLX3O43711 291 aaPredicted RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 PIP5K1CO60331 668 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A15PP0C7V4 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 FAM90A14PP0C7W9 464 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 GYS1P13807 737 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 HOXB6P17509 224 aaKnown RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 HALP42357 657 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 SOX2P48431 317 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 ALDH7A1P49419 539 aaKnown RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 RGS19P49795 217 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 PNLIPRP1P54315 467 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 RPL15P61313 204 aaKnown RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 DMWDQ09019 674 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 SIM2Q14190 667 aaPredicted RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 TUBB8Q3ZCM7 444 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 CCDC38Q502W7 563 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 ZNF569Q5MCW4 686 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 MANEAQ5SRI9 462 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 ATPAF1Q5TC12 328 aaPredicted RBP3.61□□□□□ -1.83
CLHC1-213ENST00000494539 WDR93Q6P2C0 686 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 LVRNQ6Q4G3 990 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 COLCA1Q6ZS62 124 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 ADGRF4Q8IZF3 695 aa3.61□□□□□ -1.83
CLHC1-213ENST00000494539 CACNA2D3Q8IZS8 1091 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms