RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	CREB3	O43889	395 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RHOQ	P17081	205 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	EPHB2	P29323	1055 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SLC6A4	P31645	630 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TNFRSF4	P43489	277 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	VCP	P55072	806 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TPI1	P60174	286 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	EIF4H	Q15056	248 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	DPYSL2	Q16555	572 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZNF783	Q6ZMS7	281 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PEX26	Q7Z412	305 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SETD3	Q86TU7	594 aa	Predicted RBP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	VSIG1	Q86XK7	387 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CARNMT1	Q8N4J0	409 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TRIM58	Q8NG06	486 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KCNV2	Q8TDN2	545 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	WFIKKN2	Q8TEU8	576 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	UCMA	Q8WVF2	138 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	HSPH1	Q92598	858 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SNRNP25	Q9BV90	132 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	LZTFL1	Q9NQ48	299 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ARHGEF4	Q9NR80	690 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	XPO7	Q9UIA9	1087 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	AMFR	Q9UKV5	643 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SLC27A6	Q9Y2P4	619 aa		13.55	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TBC1D3B	A6NDS4	549 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	OTOL1	A6NHN0	477 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	EEF2K	O00418	725 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	NPC1	O15118	1278 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TULP3	O75386	442 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	LRIG2	O94898	1065 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	LUC7L3	O95232	432 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ATP5B	P06576	529 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RARA	P10276	462 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	COMT	P21964	271 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	HOXD9	P28356	352 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	OR1E1	P30953	314 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	MAGEA9	P43362	315 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	MAPKAPK2	P49137	400 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RPS24	P62847	133 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SLC25A11	Q02978	314 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SULT2A1	Q06520	285 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	HS1BP3	Q53T59	392 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TRMT11	Q7Z4G4	463 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ANKS1B	Q7Z6G8	1248 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ETFBKMT	Q8IXQ9	262 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	AHI1	Q8N157	1196 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CCAR2	Q8N163	923 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CFAP52	Q8N1V2	620 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	LZTR1	Q8N653	840 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ARFGAP1	Q8N6T3	406 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	NAT16	Q8N8M0	369 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	BHMT	Q93088	406 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZNF830	Q96NB3	372 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	MAK16	Q9BXY0	300 aa	Known RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PLK2	Q9NYY3	685 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	FBXO10	Q9UK96	956 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	DUSP10	Q9Y6W6	482 aa		13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.54	□□□□□ -0.24
SKIV2L-215	ENST00000494058		A0A0A0MRY4	1105 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZNF487	B1APH4	448 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KIF5C	O60282	957 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KAT7	O95251	611 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZFX	P17010	805 aa	Predicted RBP	13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SERPINB6	P35237	376 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	GALK1	P51570	392 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	CDH6	P55285	790 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TMEM196	Q5HYL7	178 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KCNT1	Q5JUK3	1230 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RNF43	Q68DV7	783 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RCOR2	Q8IZ40	523 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	IGSF8	Q969P0	613 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	RBM41	Q96IZ5	413 aa	Known RBP	13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ZNF670	Q9BS34	389 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	IER2	Q9BTL4	223 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	KCNF1	Q9H3M0	494 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ANLN	Q9NQW6	1124 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	HPCAL4	Q9UM19	191 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TFR2	Q9UP52	801 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	PLA2G4C	Q9UP65	541 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	TBC1D30	Q9Y2I9	924 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	SIT1	Q9Y3P8	196 aa		13.53	□□□□□ -0.24
SKIV2L-215	ENST00000494058	ILVBL	A1L0T0	632 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	KRBA1	A5PL33	1030 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	TMEM221	A6NGB7	291 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	WASH4P	A8MWX3	477 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058		M0R296	226 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	ATG13	O75143	517 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	PALM	O75781	387 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	ASL	P04424	464 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	POLR2E	P19388	210 aa	Known RBP	13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	IL1R2	P27930	398 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	HOXC13	P31276	330 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	GJC1	P36383	396 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	NNMT	P40261	264 aa		13.52	□□□□□ -0.25
SKIV2L-215	ENST00000494058	OPRD1	P41143	372 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms