RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 NDUFS2O75306 463 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ZNF217O75362 1048 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 KCNK5O95279 499 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 CFIP05156 583 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 CD19P15391 556 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 BCKDHBP21953 392 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 NOS3P29474 1203 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 CDC25BP30305 580 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 PRCPP42785 496 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 TKTL1P51854 596 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 IRX4P78413 519 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 NUCB2P80303 420 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 RPL6Q02878 288 aaKnown RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 ARID5AQ03989 594 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 CETN1Q12798 172 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 LMAN2Q12907 356 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 STARD3Q14849 445 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 UAP1L1Q3KQV9 507 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ZCWPW2Q504Y3 356 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SGO2Q562F6 1265 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 TRIM61Q5EBN2 209 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SPDYCQ5MJ68 293 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 N4BP2L1Q5TBK1 243 aaPredicted RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 ZNF658Q5TYW1 1059 aaPredicted RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 LYSMD4Q5XG99 296 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SLC36A4Q6YBV0 504 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SYT12Q8IV01 421 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ZNF276Q8N554 614 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ANKRD52Q8NB46 1076 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 OLIG1Q8TAK6 271 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 RNF139Q8WU17 664 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 UCMAQ8WVF2 138 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 SEMA4DQ92854 862 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ERLEC1Q96DZ1 483 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 LSM14BQ9BX40 385 aaKnown RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 UBXN6Q9BZV1 441 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 MRPL18Q9H0U6 180 aaKnown RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 FAM124BQ9H5Z6 455 aaPredicted RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 LRRC4Q9HBW1 653 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 OSER1Q9NX31 292 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 PLK2Q9NYY3 685 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 MARCH2Q9P0N8 246 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 ARMCX3Q9UH62 379 aaPredicted RBP7.9□□□□□ -1.14
RBM39-238ENST00000493853 ANGPTL2Q9UKU9 493 aa7.9□□□□□ -1.14
RBM39-238ENST00000493853 FANCMQ8IYD8 2048 aa7.9□□□□□ -1.15
RBM39-238ENST00000493853 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SLC12A8A0AV02 714 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 LNP1A1A4G5 178 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 PATE3B3GLJ2 98 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 PSMA7O14818 248 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 TM4SF5O14894 197 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SLC16A3O15427 465 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 SYNCRIPO60506 623 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 STC2O76061 302 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 ZBED1O96006 694 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 HNRNPLP14866 589 aaKnown RBP eCLIP7.89□□□□□ -1.15
RBM39-238ENST00000493853 ITGB7P26010 798 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 HARS2P49590 506 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 NOVA1P51513 510 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 RAD23BP54727 409 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 YWHAGP61981 247 aaKnown RBP eCLIP7.89□□□□□ -1.15
RBM39-238ENST00000493853 LRRC63Q05C16 580 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 GFPT1Q06210 699 aaPredicted RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 LRMPQ12912 555 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 CCDC40Q4G0X9 1142 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SYCP2LQ5T4T6 812 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 EGFLAMQ63HQ2 1017 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 RABEPKQ7Z6M1 372 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SCD5Q86SK9 330 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 PIGZQ86VD9 579 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 DENND1CQ8IV53 801 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SIX6OS1Q8N1H7 587 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 DEFB119Q8N690 84 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 FRMD1Q8N878 549 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SLC4A11Q8NBS3 891 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 CEP76Q8TAP6 659 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 IPO4Q8TEX9 1081 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 PMEPA1Q969W9 287 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 SLC32A1Q9H598 525 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 METTL14Q9HCE5 456 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
RBM39-238ENST00000493853 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 CALCOCO1Q9P1Z2 691 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 KIAA1257Q9ULG3 409 aa7.89□□□□□ -1.15
RBM39-238ENST00000493853 PRRT4C9JH25 899 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GFRA2O00451 464 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 XPO1O14980 1071 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 NPC1O15118 1278 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GREM1O60565 184 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ACADMP11310 421 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 VDRP11473 427 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GABRG2P18507 467 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ITPKAP23677 461 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 TBXAS1P24557 533 aaPredicted RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 CORO1AP31146 461 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 RDXP35241 583 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 PPP1R2P41236 205 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 PTGER3P43115 390 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms