RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TOGARAM2Q6ZUX3 1019 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 ACRBPQ8NEB7 543 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 CPA5Q8WXQ8 436 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 USP13Q92995 863 aaPredicted RBP12.69□□□□□ -0.38
UPF3A-210ENST00000493727 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
UPF3A-210ENST00000493727 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 LHX5Q9H2C1 402 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 DMAP1Q9NPF5 467 aaPredicted RBP12.69□□□□□ -0.38
UPF3A-210ENST00000493727 EHD2Q9NZN4 543 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 SEPT3Q9UH03 358 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 ANGPTL2Q9UKU9 493 aa12.69□□□□□ -0.38
UPF3A-210ENST00000493727 FASNP49327 2511 aaKnown RBP12.69□□□□□ -0.38
UPF3A-210ENST00000493727 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 CCDC163A0A0D9SF12 145 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TRDMT1O14717 391 aaKnown RBP12.68□□□□□ -0.38
UPF3A-210ENST00000493727 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
UPF3A-210ENST00000493727 RTN2O75298 545 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 CCDC175P0C221 793 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 GZMAP12544 262 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 PFKLP17858 780 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 CYP2F1P24903 491 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 MAGEA1P43355 309 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 GPR15P49685 360 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 RGS7P49802 495 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 SNX16P57768 344 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 PDE4CQ08493 712 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 PDCLQ13371 301 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 FBXO43Q4G163 708 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TMEM196Q5HYL7 178 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 C10orf76Q5T2E6 689 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TXNDC8Q6A555 127 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 ACAD10Q6JQN1 1059 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 VSTM1Q6UX27 236 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 WDR5BQ86VZ2 330 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 ERICH1Q86X53 443 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TTC8Q8TAM2 541 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 C11orf70Q9BRQ4 267 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 MIS12Q9H081 205 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
UPF3A-210ENST00000493727 RXFP3Q9NSD7 469 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 TAS2R14Q9NYV8 317 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 MYH10P35580 1976 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
UPF3A-210ENST00000493727 NUP205Q92621 2012 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 F8VP50 259 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 FTLP02792 175 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CALB1P05937 261 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CKMP06732 381 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 H2AFZP0C0S5 128 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 UNGP13051 313 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CD33P20138 364 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 ABCB4P21439 1286 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 DRD1P21728 446 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CDH5P33151 784 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 GPD2P43304 727 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 SFSWAPQ12872 951 aaKnown RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 DDR2Q16832 855 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CLEC20AQ6ZU45 233 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 H2AFVQ71UI9 128 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CEP68Q76N32 757 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 SIX6OS1Q8N1H7 587 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CTNNBL1Q8WYA6 563 aaPredicted RBP12.67□□□□□ -0.38
UPF3A-210ENST00000493727 ATP2A3Q93084 1043 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 PPP1R13BQ96KQ4 1090 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 LRRC4Q9HBW1 653 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 HPS4Q9NQG7 708 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 ADAM22Q9P0K1 906 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 SLC8A2Q9UPR5 921 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 PCDHA13Q9Y5I0 950 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 PKD1L2Q7Z442 2459 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
UPF3A-210ENST00000493727 TULP2O00295 520 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 PIK3R2O00459 728 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 CCP110O43303 1012 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 TADA3O75528 432 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 EPN2O95208 641 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 LCA5LO95447 670 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 ZNF806P0C7X5 589 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 LCP1P13796 627 aa12.66□□□□□ -0.38
UPF3A-210ENST00000493727 TCF3P15923 654 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms