RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 RNASEH2AO75792 299 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 WISP1O95388 367 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 ZBED1O96006 694 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 CD70P32970 193 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 NUDT1P36639 197 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 ADPRHP54922 357 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 C1orf220Q5T0J3 134 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 ARHGAP40Q5TG30 622 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 SND1Q7KZF4 910 aaKnown RBP eCLIP14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 TTC39CQ8N584 583 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 FAXDC2Q96IV6 333 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 OMDQ99983 421 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 DPH1Q9BZG8 443 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 MTG2Q9H4K7 406 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 CPNE5Q9HCH3 593 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 ITIH6Q6UXX5 1313 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 PIEZO2Q9H5I5 2752 aa14.81□□□□□ -0.04
PRPF40A-211ENST00000493468 TARSL2A2RTX5 802 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 IRAK2O43187 625 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 GOT1P17174 413 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 CD58P19256 250 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 SLC8A1P32418 973 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 SGSHP51688 502 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 TKTL1P51854 596 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 SLC8A3P57103 927 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 C8orf34Q49A92 452 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 C9orf64Q5T6V5 341 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 PIK3R6Q5UE93 754 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 CDCP2Q5VXM1 449 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 ARHGAP17Q68EM7 881 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 KDM7AQ6ZMT4 941 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 SPATS2Q86XZ4 545 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 KCNE4Q8WWG9 221 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 MED8Q96G25 268 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 MRGPRX3Q96LB0 322 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 PCDHB1Q9Y5F3 818 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 DOCK9Q9BZ29 2069 aa14.8□□□□□ -0.04
PRPF40A-211ENST00000493468 UBR5O95071 2799 aaPredicted RBP14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 MAPK13O15264 365 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 LZTS3O60299 673 aaPredicted RBP14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 PPP6R2O75170 966 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 ADH1BP00325 375 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 C5AR1P21730 350 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 LSSP48449 732 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 VAC14Q08AM6 782 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 CUL4AQ13619 759 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 LY6DQ14210 128 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 IGF2-ASQ6U949 168 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 MMAAQ8IVH4 418 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 AADATQ8N5Z0 425 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 ANKRD52Q8NB46 1076 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 LINC00301Q8NCQ3 95 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 FIBINQ8TAL6 211 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 RNF139Q8WU17 664 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 FAM131CQ96AQ9 280 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 NAF1Q96HR8 494 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 HEXIM2Q96MH2 286 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 DEPDC7Q96QD5 511 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 ULBP1Q9BZM6 244 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 KCTD10Q9H3F6 313 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 KDM4CQ9H3R0 1056 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 DMTF1Q9Y222 760 aa14.79□□□□□ -0.04
PRPF40A-211ENST00000493468 COL27A1Q8IZC6 1860 aaPredicted RBP14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 PDXKO00764 312 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 SIGLEC6O43699 453 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 TBL1XO60907 577 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 IGLV3-27P01718 113 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 NR3C1P04150 777 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 MPOP05164 745 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 NEFLP07196 543 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 SRPRAP08240 638 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 CSKP41240 450 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 GABREP78334 506 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 ENPEPQ07075 957 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 STK38Q15208 465 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 FAM133BQ5BKY9 247 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 MFN1Q8IWA4 741 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 SCML4Q8N228 414 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 OR4C6Q8NH72 309 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 OR14C36Q8NHC7 312 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 TAS1R2Q8TE23 839 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 AZIN2Q96A70 460 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 BLZF1Q9H2G9 400 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 POLR1BQ9H9Y6 1135 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 ASCL3Q9NQ33 180 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 ARHGAP20Q9P2F6 1191 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 SFMBT1Q9UHJ3 866 aa14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 INTS6Q9UL03 887 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-211ENST00000493468 TRIM38O00635 465 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 SPTLC2O15270 562 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 SLC7A4O43246 635 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 SLC28A2O43868 658 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 GP1BAP07359 652 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 SYT1P21579 422 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 CASP1P29466 404 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 SLC11A2P49281 568 aa14.77□□□□□ -0.05
PRPF40A-211ENST00000493468 CSRP3P50461 194 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms