RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 VPS33AQ96AX1 596 aa13.91□□□□□ -0.18
TRIM11-204ENST00000493030 SENP8Q96LD8 212 aa13.91□□□□□ -0.18
TRIM11-204ENST00000493030 KLHL28Q9NXS3 571 aa13.91□□□□□ -0.18
TRIM11-204ENST00000493030 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 NPY2RP49146 381 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 VGLL4Q14135 290 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 WDR59Q6PJI9 974 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 MAP4K3Q8IVH8 894 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 METTL6Q8TCB7 284 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 MCOLN3Q8TDD5 553 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 NACC2Q96BF6 587 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 FAM153AQ9UHL3 310 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CRYL1Q9Y2S2 319 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 AGRPO00253 132 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 KRT75O95678 551 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SCNN1GP51170 649 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SLC12A3P55017 1021 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CORO7P57737 925 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 PRKAA1Q13131 559 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SPANXN3Q5MJ09 141 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 DPP10Q8N608 796 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 L1RE1Q9UN81 338 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 UBOX5O94941 541 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 FYNP06241 537 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 GTF2E2P29084 291 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CLK2P49760 499 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CCDC153Q494R4 210 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 COPS5Q92905 334 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 COMMD8Q9NX08 183 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 NCOA3Q9Y6Q9 1424 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 A0A087X0B3 334 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 TYMPP19971 482 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SOX6P35712 828 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 TRAF7Q6Q0C0 670 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 MILR1Q7Z6M3 343 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 KYQ8NBH2 561 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SYBUQ9NX95 663 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 AP4S1Q9Y587 144 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 UMODL1Q5DID0 1318 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 F8VP50 259 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 SERPINE1P05121 402 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CLTBP09497 229 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 UBA1P22314 1058 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CRABP2P29373 138 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 FEN1P39748 380 aaKnown RBP13.9□□□□□ -0.18
TRIM11-204ENST00000493030 IL5RAQ01344 420 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 IQSEC1Q6DN90 963 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CXCL17Q6UXB2 119 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 CPNE1Q99829 537 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 TSC22D4Q9Y3Q8 395 aa13.9□□□□□ -0.18
TRIM11-204ENST00000493030 A0A1B0GW55 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 MOXD2PA6NHM9 499 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 TRIM13O60858 407 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L2P0CJ85 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L3P0CJ86 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L4P0CJ87 422 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L5P0CJ88 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L6P0CJ89 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4L7P0CJ90 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 RBL1P28749 1068 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 NOS3P29474 1203 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 MMP13P45452 471 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 GSSP48637 474 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 NUP107P57740 925 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 TYW3Q6IPR3 259 aaKnown RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 LUZP2Q86TE4 346 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 TPD52L3Q96J77 140 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 DUX4Q9UBX2 424 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 MEI4A8MW99 385 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CALCAP01258 141 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 PTPRAP18433 802 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 OASLQ15646 514 aaKnown RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 ARMC12Q5T9G4 340 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 PPP1R14AQ96A00 147 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CENPTQ96BT3 561 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 ZDHHC6Q9H6R6 413 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 MARCH2Q9P0N8 246 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 VPS51Q9UID3 782 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CNOT3O75175 753 aaKnown RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 SETMARQ53H47 684 aaPredicted RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 PRAMEF19Q5SWL8 479 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CDK20Q8IZL9 346 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CSGALNACT1Q8TDX6 532 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 FAM220BPB1ANY3 271 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 CYP2A6P11509 494 aaPredicted RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 MTA1Q13330 715 aa13.89□□□□□ -0.19
TRIM11-204ENST00000493030 TCHHL1Q5QJ38 904 aaPredicted RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 OTUD3Q5T2D3 398 aaPredicted RBP13.89□□□□□ -0.19
TRIM11-204ENST00000493030 WSCD1Q658N2 575 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms