RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SOCS7O14512 581 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 SNX2O60749 519 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 GPR32O75388 356 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 ASGR1P07306 291 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 STMN1P16949 149 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 BGNP21810 368 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 CALB2P22676 271 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 LRPAP1P30533 357 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 TUFMP49411 452 aaKnown RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 ALDH18A1P54886 795 aaKnown RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 GJA9P57773 515 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 SESN3P58005 492 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 AP2B1P63010 937 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF177Q13360 481 aaPredicted RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 SIX1Q15475 284 aaPredicted RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 TAF11Q15544 211 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 KCNA10Q16322 511 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 FNBP1LQ5T0N5 605 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 AGAP9Q5VTM2 703 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 MRNIPQ6NTE8 343 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 VSTM1Q6UX27 236 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 SLC24A5Q71RS6 500 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 FAM228AQ86W67 206 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 NUP93Q8N1F7 819 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 WDTC1Q8N5D0 677 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 SLC25A41Q8N5S1 370 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 NAT8LQ8N9F0 302 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 LRGUKQ96M69 825 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 CINPQ9BW66 212 aaPredicted RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 TRPM5Q9NZQ8 1165 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 PCDHB8Q9UN66 801 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 CDK5RAP2Q96SN8 1893 aa7.52□□□□□ -1.2
NPHP3-208ENST00000490993 HEATR9A2RTY3 570 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CYBBP04839 570 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 SERPINE1P05121 402 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CPA3P15088 417 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 XPAP23025 273 aaPredicted RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 HNRNPH1P31943 449 aaKnown RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 WNT7BP56706 349 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 BMPR2Q13873 1038 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PCID2Q5JVF3 399 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 P2RY11Q96G91 374 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 EFHD1Q9BUP0 239 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 TMEM120AQ9BXJ8 343 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ILKAPQ9H0C8 392 aaPredicted RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 KIF9Q9HAQ2 790 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 SF3B1O75533 1304 aaKnown RBP eCLIP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 TRPC5OSA6NMA1 111 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 KCNK1O00180 336 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PRRG1O14668 218 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 RALBP11234 206 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 HOXB8P17481 243 aaPredicted RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ADRA1DP25100 572 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 LMO2P25791 158 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CRABP2P29373 138 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 L1CAMP32004 1257 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 HCAR3P49019 387 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CSE1LP55060 971 aaKnown RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 DAOAP59103 153 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 RAD51Q06609 339 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 SLC12A1Q13621 1099 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PPP1R15BQ5SWA1 713 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 MON1AQ86VX9 555 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 HERC6Q8IVU3 1022 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PDZD8Q8NEN9 1154 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PCDH19Q8TAB3 1148 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PPP1R13LQ8WUF5 828 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ATP6V1E2Q96A05 226 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ZBED2Q9BTP6 218 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 GRIN2DO15399 1336 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ZBTB42B2RXF5 422 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 GNRH1P01148 92 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 SLC4A1P02730 911 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ENO1P06733 434 aaKnown RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PYGLP06737 847 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 PTPN4P29074 926 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 GJA5P36382 358 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 GLUD2P49448 558 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CLCNKBP51801 687 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CCDC15Q0P6D6 951 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 HIC1Q14526 733 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CCL14Q16627 93 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 MORN1Q5T089 497 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 C1orf146Q5VVC0 180 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 SLC9A4Q6AI14 798 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 TMEM169Q96HH4 297 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 CELF6Q96J87 481 aaKnown RBP7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ZFP42Q96MM3 310 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 MUC3BQ9H195 1237 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 KCNK4Q9NYG8 393 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 RABGEF1Q9UJ41 708 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ACOT9Q9Y305 439 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 ARFGEF1Q9Y6D6 1849 aa7.52□□□□□ -1.21
NPHP3-208ENST00000490993 RAMP2O60895 175 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 OVGP1Q12889 678 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 PDAP1Q13442 181 aaKnown RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 TAF5Q15542 800 aa7.51□□□□□ -1.21
NPHP3-208ENST00000490993 LACTB2Q53H82 288 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 N4BP2L1Q5TBK1 243 aaPredicted RBP7.51□□□□□ -1.21
NPHP3-208ENST00000490993 KDELC2Q7Z4H8 507 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms