RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ATXN2Q99700 1313 aaKnown RBP20.44■□□□□ 0.86
SMC4-222ENST00000490207 CACNA1AO00555 2505 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 M0QYT0 321 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 DLDP09622 509 aaKnown RBP20.43■□□□□ 0.86
SMC4-222ENST00000490207 SCNN1AP37088 669 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 DPP6P42658 865 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 SULT1E1P49888 294 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 COPAP53621 1224 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 LIMK1P53667 647 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 OTUD1Q5VV17 481 aaPredicted RBP20.43■□□□□ 0.86
SMC4-222ENST00000490207 NAA35Q5VZE5 725 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 CACUL1Q86Y37 369 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 TMPRSS6Q8IU80 811 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 ZNF366Q8N895 744 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 SIPA1Q96FS4 1042 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 PRMT1Q99873 361 aaKnown RBP20.43■□□□□ 0.86
SMC4-222ENST00000490207 EDEM2Q9BV94 578 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 TMEM245Q9H330 911 aa20.43■□□□□ 0.86
SMC4-222ENST00000490207 PATE3B3GLJ2 98 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 H0Y626 953 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 KHNYNO15037 678 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 ASLP04424 464 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 CSKP41240 450 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 STAT1P42224 750 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 RNASE9P60153 205 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 MTA1Q13330 715 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 CAMK2GQ13555 558 aaPredicted RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 C2CD6Q53TS8 623 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 FSCBQ5H9T9 825 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 RABGAP1LQ5R372 815 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 TTC39BQ5VTQ0 682 aaPredicted RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 APTXQ7Z2E3 356 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 METTL3Q86U44 580 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 SYT12Q8IV01 421 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 DEFB119Q8N690 84 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 OR2T3Q8NH03 318 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 CPA5Q8WXQ8 436 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 PRCCQ92733 491 aaPredicted RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 ERGIC2Q96RQ1 377 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 NPY6RQ99463 290 aa20.42■□□□□ 0.86
SMC4-222ENST00000490207 USP36Q9P275 1121 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 INTS6Q9UL03 887 aaKnown RBP20.42■□□□□ 0.86
SMC4-222ENST00000490207 LNP1A1A4G5 178 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 DCDC2BA2VCK2 349 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 GOLGA8SH3BPF8 625 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 NDUFS2O75306 463 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 MOCS3O95396 460 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 ACADMP11310 421 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 ATP1A3P13637 1013 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 ITPKAP23677 461 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 FMO1Q01740 532 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 CDR2Q01850 454 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 PITRM1Q5JRX3 1037 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 STPG1Q5TH74 334 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 PEAR1Q5VY43 1037 aaPredicted RBP20.41■□□□□ 0.86
SMC4-222ENST00000490207 IL31Q6EBC2 164 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 MMS22LQ6ZRQ5 1243 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 CIR1Q86X95 450 aaPredicted RBP20.41■□□□□ 0.86
SMC4-222ENST00000490207 TTC17Q96AE7 1141 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 BPIFA3Q9BQP9 254 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 ADAM33Q9BZ11 813 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 PIGVQ9NUD9 493 aa20.41■□□□□ 0.86
SMC4-222ENST00000490207 KIAA1522Q9P206 1035 aaPredicted RBP20.41■□□□□ 0.86
SMC4-222ENST00000490207 EVLQ9UI08 416 aaPredicted RBP20.41■□□□□ 0.86
SMC4-222ENST00000490207 A0A1B0GVM2 712 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 TCAF2A6NFQ2 919 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 LRRC10BA6NIK2 292 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 TFE3P19532 575 aaPredicted RBP20.4■□□□□ 0.86
SMC4-222ENST00000490207 LAMA1P25391 3075 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 CD6P30203 668 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 ST8SIA6P61647 398 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 ZNF33AQ06730 810 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 SND1Q7KZF4 910 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMC4-222ENST00000490207 SLC41A1Q8IVJ1 513 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 CCAR2Q8N163 923 aaKnown RBP20.4■□□□□ 0.86
SMC4-222ENST00000490207 HSPA12BQ96MM6 686 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 RPRD1AQ96P16 312 aaPredicted RBP20.4■□□□□ 0.86
SMC4-222ENST00000490207 FBRSQ9HAH7 460 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 ITM2CQ9NQX7 267 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 TMEM74BQ9NUR3 256 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 PILRBQ9UKJ0 227 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 HS3ST4Q9Y661 456 aa20.4■□□□□ 0.86
SMC4-222ENST00000490207 PAGE1O75459 146 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 CYP1A1P04798 512 aaPredicted RBP20.39■□□□□ 0.85
SMC4-222ENST00000490207 CHRNB2P17787 502 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 HOXD12P35452 270 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 FLT3P36888 993 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 GGCXP38435 758 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 TPMTP51580 245 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 CENPCQ03188 943 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 DEUP1Q05D60 604 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 AUHQ13825 339 aaKnown RBP20.39■□□□□ 0.85
SMC4-222ENST00000490207 PLEKHG6Q3KR16 790 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 TRIM61Q5EBN2 209 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 BRMS1LQ5PSV4 323 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 FBXL22Q6P050 247 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 TRIM72Q6ZMU5 477 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 DHX40Q8IX18 779 aaKnown RBP20.39■□□□□ 0.85
SMC4-222ENST00000490207 NT5C3BQ969T7 300 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 PGAP3Q96FM1 320 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms