RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SNX10Q9Y5X0 201 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 CEP290O15078 2479 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TRAV19A0A0A6YYK7 116 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 PPP1R12AO14974 1030 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TP73O15350 636 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 DAPK3O43293 454 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 ERLIN1O75477 346 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 KLKB1P03952 638 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 RHOP08100 348 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 HDCP19113 662 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 MX2P20592 715 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 CCR2P41597 374 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 NDST2P52849 883 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 MRPS25P82663 173 aaKnown RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 CBLBQ13191 982 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 PPP1R7Q15435 360 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 MAP9Q49MG5 647 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 ADGRF1Q5T601 910 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TTC39BQ5VTQ0 682 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 FBXL22Q6P050 247 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 EMBQ6PCB8 327 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 C14orf80Q86SX3 495 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 BBOF1Q8ND07 529 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 SHKBP1Q8TBC3 707 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 CCDC114Q96M63 670 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TSGA13Q96PP4 275 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 SLC22A12Q96S37 553 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 FAM118BQ9BPY3 351 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 DDX50Q9BQ39 737 aaKnown RBP13.21□□□□□ -0.29
TOP3A-206ENST00000489131 CORO1BQ9BR76 489 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TMEM121Q9BTD3 319 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 SIK2Q9H0K1 926 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 TASP1Q9H6P5 420 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 ZDHHC18Q9NUE0 388 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 ZNF510Q9Y2H8 683 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 MFHAS1Q9Y4C4 1052 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 HEY1Q9Y5J3 304 aa13.21□□□□□ -0.29
TOP3A-206ENST00000489131 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 C5orf60A6NFR6 353 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 SMAPO00193 183 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ZNF197O14709 1029 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 PER2O15055 1255 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 MTSS1O43312 755 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 GCATO75600 419 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 MOCS2O96007 188 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 KRT14P02533 472 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 MYBL2P10244 700 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 MBL2P11226 248 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ITIH2P19823 946 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 TACR2P21452 398 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 MAPKAPK2P49137 400 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CARSP49589 748 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CLCN6P51797 869 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 GDF10P55107 478 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ZXDBP98169 803 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CAV1Q03135 178 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 P3H1Q32P28 736 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CHST9Q7L1S5 443 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ARHGAP12Q8IWW6 846 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 TFB1MQ8WVM0 346 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ART4Q93070 314 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 SNF8Q96H20 258 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 SLC46A2Q9BY10 475 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 ATXN3LQ9H3M9 355 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CERS4Q9HA82 394 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 HCFC1R1Q9NWW0 138 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 AGO1Q9UL18 857 aaKnown RBP13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CHD5Q8TDI0 1954 aa13.2□□□□□ -0.3
TOP3A-206ENST00000489131 CCDC195A0A1B0GUA6 201 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 F5H5T6 163 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 H7C0C1 242 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 SGK1O00141 431 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 MYL4P12829 197 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 POU3F3P20264 500 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 CORO1AP31146 461 aaKnown RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 SLC6A4P31645 630 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 GARSP41250 739 aaKnown RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 MAGEA6P43360 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms