RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TUBB6Q9BUF5 446 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 KATNAL1Q9BW62 490 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 PCGF6Q9BYE7 350 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 ERVK-5Q9HDB9 667 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 THSD1Q9NS62 852 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 PCDHA12Q9UN75 941 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 DAAM1Q9Y4D1 1078 aa4.15□□□□□ -1.75
RFC4-213ENST00000489028 CYP3A7-CYP3A51PA0A087WV96 503 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 KIR2DS5A0A0G2JLQ3 304 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 A6NNC1 897 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 KIR2DS3K7RE56 304 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 SYT5O00445 386 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 NDUFB8O95169 186 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 ALDOAP04075 364 aaKnown RBP4.14□□□□□ -1.75
RFC4-213ENST00000489028 CYP3A7P24462 503 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 ZACNQ401N2 412 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 NUGGCQ68CJ6 796 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 COLCA1Q6ZS62 124 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 NOL8Q76FK4 1167 aaKnown RBP4.14□□□□□ -1.75
RFC4-213ENST00000489028 DDIASQ8IXT1 998 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 SPICE1Q8N0Z3 855 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 ATG16L2Q8NAA4 619 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 SLC44A5Q8NCS7 719 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 SCAMP5Q8TAC9 235 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 IP6K1Q92551 441 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 SORBS1Q9BX66 1292 aaKnown RBP4.14□□□□□ -1.75
RFC4-213ENST00000489028 MLXIPQ9HAP2 919 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 TXNRD2Q9NNW7 524 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 POT1Q9NUX5 634 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 TAGLN3Q9UI15 199 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 DAPP1Q9UN19 280 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 LRCH1Q9Y2L9 728 aa4.14□□□□□ -1.75
RFC4-213ENST00000489028 COPG1Q9Y678 874 aaKnown RBP4.14□□□□□ -1.75
RFC4-213ENST00000489028 LMTK3Q96Q04 1460 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 TMEM272A0A1B0GTI8 110 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 CXorf65A6NEN9 183 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 AGAP5A6NIR3 686 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 C3orf70A6NLC5 250 aaPredicted RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 ACKR2O00590 384 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 TULP3O75386 442 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 CYP21A2P08686 494 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 SERPINF1P36955 418 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 FOXG1P55316 489 aaPredicted RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 RBM6P78332 1123 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 RNASELQ05823 741 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 INPP5JQ15735 1006 aaPredicted RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 PIK3CD-AS1Q5SR53 167 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 PGBD2Q6P3X8 592 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 C1orf228Q6PIY5 440 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 KIAA1324Q6UXG2 1013 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 HMGB4Q8WW32 186 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 RSC1A1Q92681 617 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 SLC25A28Q96A46 364 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 NAF1Q96HR8 494 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 RTKNQ9BST9 563 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 WACQ9BTA9 647 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 SFXN1Q9H9B4 322 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 SPAG4Q9NPE6 437 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 PLCB1Q9NQ66 1216 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 PRDM8Q9NQV8 689 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 IPO11Q9UI26 975 aaKnown RBP4.13□□□□□ -1.75
RFC4-213ENST00000489028 FBXO4Q9UKT5 387 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 NFU1Q9UMS0 254 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 LAMP3Q9UQV4 416 aa4.13□□□□□ -1.75
RFC4-213ENST00000489028 TTC3P53804 2025 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3DA0A087WVF3 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3IA0A087WXS9 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3EA0A087X179 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3KA0A087X1G2 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 IGLV5-39A0A0G2JS06 123 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3BA6NDS4 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3FA6NER0 549 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 CD8B2A6NJW9 211 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3LB9A6J9 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 H3BNX3 289 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 RHODO00212 210 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 KCNAB3O43448 404 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 SKAP2O75563 359 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 ACTL6BO94805 426 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3HP0C7X1 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 CHRNB1P11230 501 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 HDAC1Q13547 482 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 FHL1Q13642 323 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TUBB8Q3ZCM7 444 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 GALNTL6Q49A17 601 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 ARL13AQ5H913 290 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3GQ6DHY5 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 SULT6B1Q6IMI4 303 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3CQ6IPX1 549 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 RFX8Q6ZV50 586 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 SLC44A2Q8IWA5 706 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 TBC1D3Q8IZP1 549 aaPredicted RBP4.12□□□□□ -1.75
RFC4-213ENST00000489028 PELI3Q8N2H9 469 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 FAM47BQ8NA70 645 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 ADPRHL1Q8NDY3 354 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 VPS37AQ8NEZ2 397 aa4.12□□□□□ -1.75
RFC4-213ENST00000489028 STT3BQ8TCJ2 826 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms