RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 FIBINQ8TAL6 211 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 TTC17Q96AE7 1141 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 FAM149B1Q96BN6 582 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 MYEOVQ96EZ4 313 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
HDAC6-231ENST00000488905 RSPH9Q9H1X1 276 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-231ENST00000488905 MTG2Q9H4K7 406 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 TLR6Q9Y2C9 796 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 ANKRD6Q9Y2G4 727 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 SNX11Q9Y5W9 270 aa19.11■□□□□ 0.65
HDAC6-231ENST00000488905 TAF4O00268 1085 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 SART1O43290 800 aaKnown RBP19.1■□□□□ 0.65
HDAC6-231ENST00000488905 FSBPO95073 299 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 ASLP04424 464 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 CD27P26842 260 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 CSKP41240 450 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 ST8SIA6P61647 398 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 HNRNPA1L2Q32P51 320 aaKnown RBP19.1■□□□□ 0.65
HDAC6-231ENST00000488905 FOXR2Q6PJQ5 311 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 LAYNQ6UX15 382 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 CCNI2Q6ZMN8 369 aaPredicted RBP19.1■□□□□ 0.65
HDAC6-231ENST00000488905 USP30Q70CQ3 517 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 CARNMT1Q8N4J0 409 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 SLC39A13Q96H72 371 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 CDC6Q99741 560 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 PABPC3Q9H361 631 aaKnown RBP19.1■□□□□ 0.65
HDAC6-231ENST00000488905 ST7Q9NRC1 585 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 TOR4AQ9NXH8 423 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 INTS6Q9UL03 887 aaKnown RBP19.1■□□□□ 0.65
HDAC6-231ENST00000488905 SCML1Q9UN30 329 aa19.1■□□□□ 0.65
HDAC6-231ENST00000488905 COL5A1P20908 1838 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-231ENST00000488905 SIN3BO75182 1162 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 MOCS2O96007 188 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-231ENST00000488905 RPL34P49207 117 aaKnown RBP19.09■□□□□ 0.65
HDAC6-231ENST00000488905 CCT8P50990 548 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 MS4A13Q5J8X5 152 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 TAC4Q86UU9 113 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 TRIM59Q8IWR1 403 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 ADAM32Q8TC27 787 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 NELFBQ8WX92 580 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 IGSF8Q969P0 613 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 MRGPRX3Q96LB0 322 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 KREMEN1Q96MU8 473 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 ORAI3Q9BRQ5 295 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 KIAA1522Q9P206 1035 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-231ENST00000488905 LHX6Q9UPM6 363 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 CTNND2Q9UQB3 1225 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 NAALADL1Q9UQQ1 740 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 BTBD3Q9Y2F9 522 aa19.09■□□□□ 0.65
HDAC6-231ENST00000488905 BICDL2A1A5D9 508 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 IGHV4-34P06331 123 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 GPD2P43304 727 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 ACADSBP45954 432 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 KCNH2Q12809 1159 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 ARID5BQ14865 1188 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 SUZ12Q15022 739 aaKnown RBP19.08■□□□□ 0.64
HDAC6-231ENST00000488905 FSCBQ5H9T9 825 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 PITRM1Q5JRX3 1037 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 KIAA0895LQ68EN5 471 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 MMS22LQ6ZRQ5 1243 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 ADAT2Q7Z6V5 191 aaKnown RBP19.08■□□□□ 0.64
HDAC6-231ENST00000488905 CCDC117Q8IWD4 279 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-231ENST00000488905 DHX40Q8IX18 779 aaKnown RBP19.08■□□□□ 0.64
HDAC6-231ENST00000488905 SCUBE3Q8IX30 993 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 ELOA2Q8IYF1 753 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-231ENST00000488905 KDM1BQ8NB78 822 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 RHBDD1Q8TEB9 315 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 TRIM62Q9BVG3 475 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 SERGEFQ9UGK8 458 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 NCKAP1Q9Y2A7 1128 aa19.08■□□□□ 0.64
HDAC6-231ENST00000488905 ITIH6Q6UXX5 1313 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 PPP1R3GB7ZBB8 358 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 MID1O15344 667 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 RNASEH1O60930 286 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 DKK1O94907 266 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 LUC7L3O95232 432 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 APOEP02649 317 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 ATXN1LP0C7T5 689 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 KRT5P13647 590 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 BMP6P22004 513 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 CTSKP43235 329 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 GRK6P43250 576 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 CST6Q15828 149 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 MEA1Q16626 185 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 DCAF6Q58WW2 860 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 DENND1BQ6P3S1 775 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 BEND5Q7L4P6 421 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 CFAP52Q8N1V2 620 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 EHBP1Q8NDI1 1231 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 GANCQ8TET4 914 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 INTS2Q9H0H0 1204 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 CCDC86Q9H6F5 360 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 FBXL12Q9NXK8 326 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 XPO7Q9UIA9 1087 aaKnown RBP19.07■□□□□ 0.64
HDAC6-231ENST00000488905 CNTN6Q9UQ52 1028 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 DOCK9Q9BZ29 2069 aa19.07■□□□□ 0.64
HDAC6-231ENST00000488905 KNTC1P50748 2209 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 A0A1W2PP55 124 aa19.06■□□□□ 0.64
HDAC6-231ENST00000488905 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms