RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 TRIM27P14373 513 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MAP4P27816 1152 aaKnown RBP6.61□□□□□ -1.35
POLR1C-208ENST00000488601 NTSR1P30989 418 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MLH1P40692 756 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 CLCN3P51790 818 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 ZNF445P59923 1031 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 DEFB109BQ30KR1 87 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 PHF19Q5T6S3 580 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 TPGS2Q68CL5 300 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 KSR1Q8IVT5 923 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 CEP97Q8IW35 865 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 SCUBE1Q8IWY4 988 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 ARMC10Q8N2F6 343 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 BTN2A2Q8WVV5 523 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 ARRDC3Q96B67 414 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MFSD3Q96ES6 412 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 RCC1LQ96I51 464 aaKnown RBP6.61□□□□□ -1.35
POLR1C-208ENST00000488601 FEM1CQ96JP0 617 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MEGF10Q96KG7 1140 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MYRFLQ96LU7 910 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 PNKPQ96T60 521 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 NUP58Q9BVL2 599 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 PREBQ9HCU5 417 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 SPHK2Q9NRA0 654 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 C1GALT1Q9NS00 363 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 TDP1Q9NUW8 608 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
POLR1C-208ENST00000488601 MAFFQ9ULX9 164 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 EMC9Q9Y3B6 208 aa6.61□□□□□ -1.35
POLR1C-208ENST00000488601 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 KRT86O43790 486 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 IGLV3-19P01714 112 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 PABPC1P11940 636 aaKnown RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 LIFP15018 202 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 SFPQP23246 707 aaKnown RBP eCLIP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 ITGB7P26010 798 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CD27P26842 260 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CD82P27701 267 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 GABRR2P28476 465 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 HOXA13P31271 388 aaPredicted RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 NOVP48745 357 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 TPMTP51580 245 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 TFAP4Q01664 338 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CDC20Q12834 499 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 BFSP1Q12934 665 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 RESTQ13127 1097 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 KIAA1324Q6UXG2 1013 aaKnown RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 TRIM59Q8IWR1 403 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 EFCAB13Q8IY85 973 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 ARHGEF39Q8N4T4 335 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 SIMC1Q8NDZ2 872 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CNNM3Q8NE01 707 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 GSTCDQ8NEC7 633 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 NRGNQ92686 78 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 SPOCK3Q9BQ16 436 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CACNG4Q9UBN1 327 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 CGGBP1Q9UFW8 167 aaPredicted RBP6.6□□□□□ -1.35
POLR1C-208ENST00000488601 OBSL1O75147 1896 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 HERC2O95714 4834 aa6.6□□□□□ -1.35
POLR1C-208ENST00000488601 RYR2Q92736 4967 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 LRP4O75096 1905 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 PRAMEF33A0A0G2JMD5 474 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 MYMKA6NI61 221 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 PRAMEF10O60809 474 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 ATP2C2O75185 946 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 VAMP4O75379 141 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 LEFTY1O75610 366 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 KCNH1O95259 989 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 MYCLP1P12525 358 aaPredicted RBP6.59□□□□□ -1.35
POLR1C-208ENST00000488601 TMOD1P28289 359 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 EIF2DP41214 584 aaKnown RBP6.59□□□□□ -1.35
POLR1C-208ENST00000488601 IFNAR2P48551 515 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 PDX1P52945 283 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
POLR1C-208ENST00000488601 CYP4F8P98187 520 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 MTF1Q14872 753 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
POLR1C-208ENST00000488601 DCAF10Q5QP82 559 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 NUGGCQ68CJ6 796 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 POMZP3Q6PJE2 187 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 ZNF517Q6ZMY9 492 aaPredicted RBP6.59□□□□□ -1.35
POLR1C-208ENST00000488601 RAB11FIP2Q7L804 512 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 THNSL2Q86YJ6 484 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 SKA1Q96BD8 255 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 SLC45A3Q96JT2 553 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 ORAI3Q9BRQ5 295 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 DUSP23Q9BVJ7 150 aa6.59□□□□□ -1.35
POLR1C-208ENST00000488601 GDF3Q9NR23 364 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms