RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SEMA4CQ9C0C4 833 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 SFXN1Q9H9B4 322 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 CHODLQ9H9P2 273 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 PDE11AQ9HCR9 933 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 TMLHEQ9NVH6 421 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 FLRT1Q9NZU1 646 aa4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 IPO11Q9UI26 975 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 COPG1Q9Y678 874 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-217ENST00000488087 ZCCHC6Q5VYS8 1495 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 WRNQ14191 1432 aaPredicted RBP eCLIP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SPATA31A5Q5VU36 1347 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SPATA31A7Q8IWB4 1347 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 CCDC189A1A4V9 331 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 USP12O75317 370 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 FAM155BO75949 473 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 CNTN5O94779 1100 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 LATS1O95835 1130 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 PLAUP00749 431 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 CD63P08962 238 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 ALDOCP09972 364 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 AKR1A1P14550 325 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 TGM2P21980 687 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 IDUAP35475 653 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 ACTR2P61160 394 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SHC2P98077 582 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 GHRHRQ02643 423 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SMAD1Q15797 465 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 LRRC24Q50LG9 513 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 KIAA1614Q5VZ46 1190 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 KIAA1324Q6UXG2 1013 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 RFX6Q8HWS3 928 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 RHPN2Q8IUC4 686 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 GALNT16Q8N428 558 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 TMEM57Q8N5G2 664 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 FSIP1Q8NA03 581 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SPPL3Q8TCT6 385 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF398Q8TD17 642 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 TM2D2Q9BX73 214 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 OSBPL5Q9H0X9 879 aaPredicted RBP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 NRIP3Q9NQ35 241 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 PI4KBQ9UBF8 816 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 FEM1BQ9UK73 627 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC8A2Q9UPR5 921 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 LZTS1Q9Y250 596 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 GPR52Q9Y2T5 361 aa4.31□□□□□ -1.72
ECHDC1-217ENST00000488087 CYP3A7-CYP3A51PA0A087WV96 503 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SMIM35A0A1B0GVV1 85 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 B9A039 149 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SEPT4O43236 478 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 HNRNPRO43390 633 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 TFRCP02786 760 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 TK1P04183 234 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 CYP21A2P08686 494 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 RFPL3SP0C7P2 107 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 RPS6KB1P23443 525 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 CYP3A7P24462 503 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 MCM2P49736 904 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 PAPOLAP51003 745 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 TAF12Q16514 161 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 GPR162Q16538 588 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC18B1Q6NT16 456 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 RBM44Q6ZP01 1051 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 ADGRF3Q8IZF5 1079 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 CEP70Q8NHQ1 597 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC2A12Q8TD20 617 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 KCNJ9Q92806 393 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 ARRDC3Q96B67 414 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SDCCAG3Q96C92 435 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 PYM1Q9BRP8 204 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 CLPBQ9H078 707 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 ABHD16BQ9H3Z7 469 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 ERVK-5Q9HDB9 667 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC25A13Q9UJS0 675 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 RCE1Q9Y256 329 aa4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-217ENST00000488087 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC22A23A1A5C7 686 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 FAM90A20PA6NIJ5 464 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 KCNU1A8MYU2 1149 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 GRM8O00222 908 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 PRR35P0CG20 571 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 IGFBP2P18065 325 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SOX2P48431 317 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC12A2P55011 1212 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 C21orf58P58505 322 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 MRPS21P82921 87 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 HSF1Q00613 529 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 B4GALNT1Q00973 533 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 POU5F1BQ06416 359 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 CDK18Q07002 472 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 STIM1Q13586 685 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms