RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 UBR7Q8N806 425 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF669Q96BR6 464 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 WRNIP1Q96S55 665 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 SNX9Q9Y5X1 595 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 CITO14578 2027 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 C2CD4BA6NLJ0 364 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 SMIM18P0DKX4 95 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ABCE1P61221 599 aaKnown RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TAP1Q03518 808 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MYBPC3Q14896 1274 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TDRD5Q8NAT2 981 aaKnown RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 RPL10LQ96L21 214 aaKnown RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TRIM8Q9BZR9 551 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 IL1RL2Q9HB29 575 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 DNAAF2Q9NVR5 837 aaKnown RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 PPME1Q9Y570 386 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 SF3B1O75533 1304 aaKnown RBP eCLIP12.7□□□□□ -0.382e-18■■■■■ 139.3
HSPG2-211ENST00000486901 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 KLF11O14901 512 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ASLP04424 464 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 DPEP1P16444 411 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 PRKCHP24723 683 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 GNL1P36915 607 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-211ENST00000486901 NME3Q13232 169 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TRIM74Q86UV6 250 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 PQLC1Q8N2U9 271 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ATP6V1E2Q96A05 226 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 SLC45A3Q96JT2 553 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ATXN10Q9UBB4 475 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 COPG2Q9UBF2 871 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 ARHGAP26Q9UNA1 814 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 COMMD3-BMI1R4GMX3 469 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
HSPG2-211ENST00000486901 MED7O43513 233 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 KLHL2O95198 593 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 STAMBPO95630 424 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 SERPINE1P05121 402 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 STT3AP46977 705 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 NAGLUP54802 743 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 MYBPC1Q00872 1141 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 PID1Q7Z2X4 250 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 STRA8Q7Z7C7 330 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 SLC39A3Q9BRY0 314 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 STYXL1Q9Y6J8 313 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 VTNP04004 478 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
HSPG2-211ENST00000486901 PLK1P53350 603 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 USP33Q8TEY7 942 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 SNX15Q9NRS6 342 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 FETUBQ9UGM5 382 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 CPSF3Q9UKF6 684 aaKnown RBP12.69□□□□□ -0.38
HSPG2-211ENST00000486901 FAM159BA6NKW6 160 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 DPP6P42658 865 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 GABRB2P47870 512 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 HDAC4P56524 1084 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 DSELQ8IZU8 1212 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 PPWD1Q96BP3 646 aaKnown RBP12.69□□□□□ -0.38
HSPG2-211ENST00000486901 LENG1Q96BZ8 264 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-211ENST00000486901 FCRL3Q96P31 734 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF518BQ9C0D4 1074 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 DPEP3Q9H4B8 488 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 CYP4F12Q9HCS2 524 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 TCF7L2Q9NQB0 619 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 DOLKQ9UPQ8 538 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 PCDHA11Q9Y5I1 949 aa12.69□□□□□ -0.38
HSPG2-211ENST00000486901 H0YCG3 227 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 FAM189A1O60320 539 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 CLIC3O95833 236 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 PRKCGP05129 697 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 CCDC130P13994 396 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 PTPN7P35236 360 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 PSMD7P51665 324 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 CXCL9Q07325 125 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 CEACAM7Q14002 265 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 ZBTB8OSQ8IWT0 167 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 ARHGAP18Q8N392 663 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 EME1Q96AY2 570 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 CDT1Q9H211 546 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-211ENST00000486901 PCDHGC3Q9UN70 934 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 NEMP2A6NFY4 417 aa12.68□□□□□ -0.38
HSPG2-211ENST00000486901 STAG3L1P0CL83 205 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms