RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TRDMT1O14717 391 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 CACNG3O60359 315 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 LILRB3O75022 631 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 RHOQP17081 205 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ATF6P18850 670 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 DNAJB2P25686 324 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PBX3P40426 434 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PGFP49763 221 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 LBX1P52954 281 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PPP2R2AP63151 447 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 WASHC5Q12768 1159 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 IFRD2Q12894 506 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PLD1Q13393 1074 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 KLHL38Q2WGJ6 581 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 C5orf22Q49AR2 442 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 FNBP1LQ5T0N5 605 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 SPOUT1Q5T280 376 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ITPRIPL1Q6GPH6 555 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 LRRC31Q6UY01 552 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 RTL10Q7L3V2 364 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 CCDC13Q8IYE1 715 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ZBED8Q8IZ13 594 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 TTC9BQ8N6N2 239 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 RTL3Q8N8U3 475 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 CCDC110Q8TBZ0 833 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PHOSPHO2Q8TCD6 241 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 CLP1Q92989 425 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 CENPTQ96BT3 561 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 C9orf72Q96LT7 481 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 LGMNQ99538 433 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 NAT9Q9BTE0 207 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 MARCH2Q9P0N8 246 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 SENP1Q9P0U3 644 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 UXTQ9UBK9 157 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 NOVA2Q9UNW9 492 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 MFHAS1Q9Y4C4 1052 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 ASB3Q9Y575 518 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 PCDHB12Q9Y5F1 795 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 HS3ST4Q9Y661 456 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 MRPL42Q9Y6G3 142 aaKnown RBP11.96□□□□□ -0.49
PRKCB-207ENST00000486868 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
PRKCB-207ENST00000486868 VWA8A3KMH1 1905 aa11.96□□□□□ -0.5
PRKCB-207ENST00000486868 PLXNA3P51805 1871 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 E9PAM4 449 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 RNF103O00237 685 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 ADAM12O43184 909 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 SUN1O94901 812 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 GJB5O95377 273 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 METTL18O95568 372 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 FGBP02675 491 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 PTPN3P26045 913 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 ALDH1A3P47895 512 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 IFNAR2P48551 515 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 NDST2P52849 883 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 IFI35P80217 286 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-207ENST00000486868 AP1B1Q10567 949 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 TEX44Q53QW1 395 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 KCTD16Q68DU8 428 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 TIGD7Q6NT04 549 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-207ENST00000486868 LRRC8BQ6P9F7 803 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF449Q6P9G9 518 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 NLRP14Q86W24 1093 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 PALM2Q8IXS6 379 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 UMODL1-AS1Q8N2C9 162 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 CCNYQ8ND76 341 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 STKLD1Q8NE28 680 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 YME1L1Q96TA2 773 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 ACSS3Q9H6R3 686 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 PRDM5Q9NQX1 630 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-207ENST00000486868 MRPL17Q9NRX2 175 aaKnown RBP11.95□□□□□ -0.5
PRKCB-207ENST00000486868 TMEM248Q9NWD8 314 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 DNMT3LQ9UJW3 386 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 LZTS1Q9Y250 596 aa11.95□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF840PA6NDX5 716 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 MSI1O43347 362 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 TLR5O60602 858 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 LATS1O95835 1130 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 APRTP07741 180 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 CTSAP10619 480 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 HMGA1P17096 107 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 ATP5C1P36542 298 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 SLC18A1P54219 525 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 GPX6P59796 221 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 MAGOHP61326 146 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 TNK2Q07912 1038 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 EFEMP1Q12805 493 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 MSS51Q4VC12 460 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 C10orf120Q5SQS8 335 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms