RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RSPH9Q9H1X1 276 aaPredicted RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 SGK2Q9HBY8 427 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 XPO7Q9UIA9 1087 aaKnown RBP19.95■□□□□ 0.78
COL27A1-205ENST00000485397 TLR6Q9Y2C9 796 aa19.95■□□□□ 0.78
COL27A1-205ENST00000485397 FAM208BQ5VWN6 2430 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 ASPMQ8IZT6 3477 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 CAPNS1P04632 268 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 KRT5P13647 590 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 ST8SIA6P61647 398 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 SCAPQ12770 1279 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 MORC3Q14149 939 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 TEAD4Q15561 434 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 DCAF6Q58WW2 860 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 DHX40Q8IX18 779 aaKnown RBP19.94■□□□□ 0.78
COL27A1-205ENST00000485397 BAHD1Q8TBE0 780 aaPredicted RBP19.94■□□□□ 0.78
COL27A1-205ENST00000485397 RHBDD1Q8TEB9 315 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 ORAI3Q9BRQ5 295 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 INTS2Q9H0H0 1204 aaKnown RBP19.94■□□□□ 0.78
COL27A1-205ENST00000485397 PABPC3Q9H361 631 aaKnown RBP19.94■□□□□ 0.78
COL27A1-205ENST00000485397 OSGEPQ9NPF4 335 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 CNTN6Q9UQ52 1028 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 BTBD3Q9Y2F9 522 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 ANKRD6Q9Y2G4 727 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 PCDHGB2Q9Y5G2 931 aa19.94■□□□□ 0.78
COL27A1-205ENST00000485397 BICDL2A1A5D9 508 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 TYW5A2RUC4 315 aaKnown RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 AFPP02771 609 aaKnown RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 ASLP04424 464 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 CD27P26842 260 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 CTSOP43234 321 aaPredicted RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 GRIA4P48058 902 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 NNTQ13423 1086 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 CDH18Q13634 790 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 HNRNPA1L2Q32P51 320 aaKnown RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 PITRM1Q5JRX3 1037 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 KCNT1Q5JUK3 1230 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 FOXR2Q6PJQ5 311 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 CCNI2Q6ZMN8 369 aaPredicted RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 GANCQ8TET4 914 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 SRRTQ9BXP5 876 aaKnown RBP19.93■□□□□ 0.78
COL27A1-205ENST00000485397 SLC4A5Q9BY07 1137 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 ACP6Q9NPH0 428 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 TOR4AQ9NXH8 423 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 FBXL12Q9NXK8 326 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 SERGEFQ9UGK8 458 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 CYTH4Q9UIA0 394 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 NCKAP1Q9Y2A7 1128 aa19.93■□□□□ 0.78
COL27A1-205ENST00000485397 FAM47DPA6NHR8 397 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 TTC34A8MYJ7 566 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 FLRT2O43155 660 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 PAPSS1O43252 624 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 SART1O43290 800 aaKnown RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 LETM1O95202 739 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 LUC7L3O95232 432 aaKnown RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 GNA14O95837 355 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 IGHV4-34P06331 123 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 ATXN1LP0C7T5 689 aaKnown RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 ACADSBP45954 432 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 BECN1Q14457 450 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 ZC3H12AQ5D1E8 599 aaKnown RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 C9orf64Q5T6V5 341 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 RAP1GAP2Q684P5 730 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 KIAA0895LQ68EN5 471 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 PROSER1Q86XN7 944 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 CCDC117Q8IWD4 279 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 LGI2Q8N0V4 545 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 UBE2TQ9NPD8 197 aaPredicted RBP19.92■□□□□ 0.78
COL27A1-205ENST00000485397 ERVW-1Q9UQF0 538 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.92■□□□□ 0.783e-7■□□□□ 8.9
COL27A1-205ENST00000485397 CABIN1Q9Y6J0 2220 aa19.92■□□□□ 0.78
COL27A1-205ENST00000485397 A0A1W2PP55 124 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 GOLGA8CPA6NN73 597 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 E5RJQ4 531 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 H0Y8X5 98 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 CAPN9O14815 690 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 MID1O15344 667 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 MARSP56192 900 aaKnown RBP19.91■□□□□ 0.78
COL27A1-205ENST00000485397 PITX1P78337 314 aaPredicted RBP19.91■□□□□ 0.78
COL27A1-205ENST00000485397 SUZ12Q15022 739 aaKnown RBP19.91■□□□□ 0.78
COL27A1-205ENST00000485397 CST6Q15828 149 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 USP30Q70CQ3 517 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 BEND5Q7L4P6 421 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 CHSY1Q86X52 802 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 MMAAQ8IVH4 418 aaKnown RBP19.91■□□□□ 0.78
COL27A1-205ENST00000485397 APCDD1Q8J025 514 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 ZNF606Q8WXB4 792 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 CDC6Q99741 560 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 NEUROG2Q9H2A3 272 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 KIAA1522Q9P206 1035 aaPredicted RBP19.91■□□□□ 0.78
COL27A1-205ENST00000485397 SLCO3A1Q9UIG8 710 aa19.91■□□□□ 0.78
COL27A1-205ENST00000485397 PLXNB3Q9ULL4 1909 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 RNASEH1O60930 286 aaKnown RBP19.9■□□□□ 0.78
COL27A1-205ENST00000485397 GADD45BO75293 160 aaPredicted RBP19.9■□□□□ 0.78
COL27A1-205ENST00000485397 TRUB2O95900 331 aaKnown RBP19.9■□□□□ 0.78
COL27A1-205ENST00000485397 APOEP02649 317 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 TACR2P21452 398 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 CTSKP43235 329 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 NUMBP49757 651 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 GALCP54803 685 aa19.9■□□□□ 0.78
COL27A1-205ENST00000485397 PAK1Q13153 545 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 452.2 ms