RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 STRN3Q13033 797 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 LACTB2Q53H82 288 aaPredicted RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 NT5DC1Q5TFE4 455 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 SFMBT2Q5VUG0 894 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 KIAA0895LQ68EN5 471 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 CAPRIN2Q6IMN6 1127 aaKnown RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 SERPINA13PQ6UXR4 307 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 DSG4Q86SJ6 1040 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 TEX19Q8NA77 164 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 GALNT11Q8NCW6 608 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 MARVELD3Q96A59 401 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 PRR11Q96HE9 360 aaPredicted RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 SLITRK1Q96PX8 696 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 EIF2AK1Q9BQI3 630 aaKnown RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 KIFC3Q9BVG8 833 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 FUT8Q9BYC5 575 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 XPO4Q9C0E2 1151 aaKnown RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 PLEKHA5Q9HAU0 1116 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 CD248Q9HCU0 757 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 ABCB6Q9NP58 842 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 LSM7Q9UK45 103 aaKnown RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 RAB21Q9UL25 225 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 PCDHA7Q9UN72 937 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 SLCO1B1Q9Y6L6 691 aa6.65□□□□□ -1.34
CAPN13-206ENST00000485248 ZFC3H1O60293 1989 aaKnown RBP6.65□□□□□ -1.34
CAPN13-206ENST00000485248 POLQO75417 2590 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PLXNA2O75051 1894 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 ANAPC1Q9H1A4 1944 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 A0A1B0GVM2 712 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 ARHGAP10A1A4S6 786 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 LRRC72A6NJI9 287 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 FFAR2O15552 330 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 SLC37A4O43826 429 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PPP6R2O75170 966 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 SLITRK3O94933 977 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 LUC7L3O95232 432 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 LYPLA2O95372 231 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PDGFAP04085 211 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CYP11A1P05108 521 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PRKCGP05129 697 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 IVLP07476 585 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 JMJD7P0C870 316 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CXCL8P10145 99 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CKMT1AP12532 417 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 DRD2P14416 443 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TYRP14679 529 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CYP2F1P24903 491 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 SLC5A2P31639 672 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 UQCRFS1P47985 274 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TAF6P49848 677 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 MLLT10P55197 1068 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CYP4F2P78329 520 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 EIF3IQ13347 325 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 SAFBQ15424 915 aaKnown RBP eCLIP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PPP1R26Q5T8A7 1209 aaPredicted RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 C4orf50Q6ZRC1 276 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TPGS1Q6ZTW0 290 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 Q6ZUG5 572 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 DENND5BQ6ZUT9 1274 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 VASH1Q7L8A9 365 aaPredicted RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TIPARPQ7Z3E1 657 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 VASH2Q86V25 355 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TMEM139Q8IV31 216 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 VSTM4Q8IW00 320 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 MSANTD4Q8NCY6 345 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 MNS1Q8NEH6 495 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 OR2T3Q8NH03 318 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 IFI44Q8TCB0 444 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 EDEM1Q92611 657 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 KIFAP3Q92845 792 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 CATSPER2Q96P56 530 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 ACO2Q99798 780 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 STRADBQ9C0K7 418 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 HSD3B7Q9H2F3 369 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 ERVMER34-1Q9H9K5 563 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 ARFGAP3Q9NP61 516 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 TRMT1Q9NXH9 659 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 IFNKQ9P0W0 207 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 VPS54Q9P1Q0 977 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 PCDHA4Q9UN74 947 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 HPSEQ9Y251 543 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 FCF1Q9Y324 198 aaKnown RBP6.64□□□□□ -1.35
CAPN13-206ENST00000485248 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 MYOFQ9NZM1 2061 aa6.64□□□□□ -1.35
CAPN13-206ENST00000485248 KLF18A0A0U1RQI7 1052 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 VWA3AA6NCI4 1184 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 NEMP2A6NFY4 417 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 A6NJY4 79 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TTLL8A6PVC2 850 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 EFCAB7A8K855 629 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 PRRT4C9JH25 899 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TLR4O00206 839 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TRIM24O15164 1050 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 CLDN3O15551 220 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 CACNG3O60359 315 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 SEMA7AO75326 666 aa6.63□□□□□ -1.35
CAPN13-206ENST00000485248 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
CAPN13-206ENST00000485248 TCEA3O75764 348 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms