RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ADIPOR2Q86V24 386 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 CACUL1Q86Y37 369 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 ZNF366Q8N895 744 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 SUMF1Q8NBK3 374 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 WFIKKN2Q8TEU8 576 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 PGAP3Q96FM1 320 aaPredicted RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 SLC6A17Q9H1V8 727 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 SEMA4AQ9H3S1 761 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 ARHGEF38Q9NXL2 777 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 VPS13AQ96RL7 3174 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 A0A1W2PQF6 199 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 HLA-EP13747 358 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 PRKCHP24723 683 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 GSCP56915 257 aaPredicted RBP16.76■□□□□ 0.27
DDR1-246ENST00000485023 ZBED6P86452 979 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 FNDC3BQ53EP0 1204 aaKnown RBP16.76■□□□□ 0.27
DDR1-246ENST00000485023 RNF43Q68DV7 783 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 WDR59Q6PJI9 974 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 ARCQ7LC44 396 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.76■□□□□ 0.27
DDR1-246ENST00000485023 RASSF3Q86WH2 238 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDR1-246ENST00000485023 FIBINQ8TAL6 211 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 FAM172AQ8WUF8 416 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 GAB3Q8WWW8 586 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 GABRG3Q99928 467 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.76■□□□□ 0.27
DDR1-246ENST00000485023 THAP10Q9P2Z0 257 aaPredicted RBP16.76■□□□□ 0.27
DDR1-246ENST00000485023 NCDNQ9UBB6 729 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 EBF1Q9UH73 591 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 RAB23Q9ULC3 237 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
DDR1-246ENST00000485023 FANCMQ8IYD8 2048 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 CCP110O43303 1012 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 GABRG2P18507 467 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 POLR2EP19388 210 aaKnown RBP16.75■□□□□ 0.27
DDR1-246ENST00000485023 CNR2P34972 360 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 CSKP41240 450 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 RPL7AP62424 266 aaKnown RBP16.75■□□□□ 0.27
DDR1-246ENST00000485023 STARD3Q14849 445 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 PITRM1Q5JRX3 1037 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 BNIPLQ7Z465 357 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 DCLK2Q8N568 766 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 ZNF557Q8N988 423 aaPredicted RBP16.75■□□□□ 0.27
DDR1-246ENST00000485023 RLN3Q8WXF3 142 aa16.75■□□□□ 0.27
DDR1-246ENST00000485023 INTS6Q9UL03 887 aaKnown RBP16.75■□□□□ 0.27
DDR1-246ENST00000485023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDR1-246ENST00000485023 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 TCAF2A6NFQ2 919 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 SRGAP2O75044 1071 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 CNTN5O94779 1100 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 SERPING1P05155 500 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 EPHX1P07099 455 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 NDUFV2P19404 249 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 CTSOP43234 321 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 PTPN9P43378 593 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 MTA1Q13330 715 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 PTPRNQ16849 979 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 TTC39BQ5VTQ0 682 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 KIAA1324Q6UXG2 1013 aaKnown RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 KIAA0907Q7Z7F0 614 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 APCDD1Q8J025 514 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 CCDC185Q8N715 623 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 FRMD1Q8N878 549 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 ZNF653Q96CK0 615 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 LMLNQ96KR4 655 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 KIAA1522Q9P206 1035 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 MYO1AQ9UBC5 1043 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
DDR1-246ENST00000485023 ZFHX2Q9C0A1 2572 aaPredicted RBP16.74■□□□□ 0.27
DDR1-246ENST00000485023 USP34Q70CQ2 3546 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 E9PAM4 449 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 ZBTB24O43167 697 aaPredicted RBP16.73■□□□□ 0.27
DDR1-246ENST00000485023 TIMM44O43615 452 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 SYNCRIPO60506 623 aaKnown RBP16.73■□□□□ 0.27
DDR1-246ENST00000485023 ENDOD1O94919 500 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 ATP5BP06576 529 aaKnown RBP16.73■□□□□ 0.27
DDR1-246ENST00000485023 BCKDHBP21953 392 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 MZF1P28698 734 aaPredicted RBP16.73■□□□□ 0.27
DDR1-246ENST00000485023 HDAC4P56524 1084 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 OGDHQ02218 1023 aa16.73■□□□□ 0.27
DDR1-246ENST00000485023 USP39Q53GS9 565 aaKnown RBP16.73■□□□□ 0.27
DDR1-246ENST00000485023 ALFQ53S48 1182 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms