RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 GRIA4P48058 902 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 TEAD4Q15561 434 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 HLA-BQ31612 363 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 HNRNPA1L2Q32P51 320 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 DCAF6Q58WW2 860 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 SYPL2Q5VXT5 272 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 FAM124AQ86V42 546 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 BAHD1Q8TBE0 780 aaPredicted RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 MYEOVQ96EZ4 313 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 THAP9Q9H5L6 903 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 POPDC2Q9HBU9 364 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 TM7SF3Q9NS93 570 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 ASNSD1Q9NWL6 643 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 RWDD2AQ9UIY3 292 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 NCKAP1Q9Y2A7 1128 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 USP24Q9UPU5 2620 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 BIN1O00499 593 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 LUC7L3O95232 432 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 MOCS3O95396 460 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 APOEP02649 317 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 GLI1P08151 1106 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 RPS24P62847 133 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 SLC12A1Q13621 1099 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 PITRM1Q5JRX3 1037 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 CARNMT1Q8N4J0 409 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 CHCHD4Q8N4Q1 142 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 FAM149B1Q96BN6 582 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 IL21RQ9HBE5 538 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 TM9SF3Q9HD45 589 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 ADAMTS1Q9UHI8 967 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 CYTH4Q9UIA0 394 aa11.87□□□□□ -0.51
SCFD1-206ENST00000484733 APOBEC2Q9Y235 224 aaKnown RBP11.87□□□□□ -0.51
SCFD1-206ENST00000484733 A0A1B0GVT2 93 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CAPN9O14815 690 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 RNASEH1O60930 286 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CAPNS1P04632 268 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 FTH1P19P0C7X4 201 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 TACR2P21452 398 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 GNA15P30679 374 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 VASPP50552 380 aaPredicted RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 SUZ12Q15022 739 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 KIAA0895LQ68EN5 471 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CACUL1Q86Y37 369 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 ATP6V0D2Q8N8Y2 350 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 BIRC7Q96CA5 298 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CDC6Q99741 560 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 ORAI3Q9BRQ5 295 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 EDDM13A0A1B0GTR0 161 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 E5RJQ4 531 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 FLRT2O43155 660 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 THAP12O43422 761 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 DKK1O94907 266 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 TRUB2O95900 331 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 PLK1P53350 603 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 MTA1Q13330 715 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 CDH18Q13634 790 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 FSCBQ5H9T9 825 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 C9orf64Q5T6V5 341 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 LGI2Q8N0V4 545 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 ZCCHC14Q8WYQ9 949 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 PRMT1Q99873 361 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 FZD4Q9ULV1 537 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
SCFD1-206ENST00000484733 FNDC3AQ9Y2H6 1198 aaKnown RBP11.86□□□□□ -0.51
SCFD1-206ENST00000484733 GTPBP10A4D1E9 387 aaKnown RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 DFNA5O60443 496 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SIN3BO75182 1162 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SLC2A3P11169 496 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 CSNK1EP49674 416 aaKnown RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 OXCT1P55809 520 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 ZC3H12AQ5D1E8 599 aaKnown RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 GBP6Q6ZN66 633 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SNX19Q92543 992 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 IGSF8Q969P0 613 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 KIAA1468Q9P260 1216 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 TJP2Q9UDY2 1190 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SRRM3A6NNA2 597 aaPredicted RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 BECN2A8MW95 431 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 KCNU1A8MYU2 1149 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 IGHV4-34P06331 123 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 ECT2LQ008S8 904 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SULT2A1Q06520 285 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms