RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
DDR1-245ENST00000484556 SEPT3Q9UH03 358 aa18.72■□□□□ 0.59
DDR1-245ENST00000484556 USP9YO00507 2555 aaPredicted RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3DA0A087WVF3 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3IA0A087WXS9 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3EA0A087X179 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3KA0A087X1G2 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 FRMD3A2A2Y4 597 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3FA6NER0 549 aaPredicted RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 CDRT15L2A8MXV6 281 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3LB9A6J9 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3HP0C7X1 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 GIMD1P0DJR0 217 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 HOXD13P35453 343 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 SFSWAPQ12872 951 aaKnown RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 SRSF6Q13247 344 aaKnown RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 HNRNPA1L2Q32P51 320 aaKnown RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 POM121L1PQ3SYA9 428 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3GQ6DHY5 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3CQ6IPX1 549 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 SND1Q7KZF4 910 aaKnown RBP eCLIP18.71■□□□□ 0.59
DDR1-245ENST00000484556 RSRC2Q7L4I2 434 aaKnown RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 TBC1D3Q8IZP1 549 aaPredicted RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 CRYBG2Q8N1P7 616 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 APOLD1Q96LR9 279 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 CDK5RAP1Q96SZ6 601 aaKnown RBP18.71■□□□□ 0.59
DDR1-245ENST00000484556 VRTNQ9H8Y1 702 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 KCNK4Q9NYG8 393 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 TJP2Q9UDY2 1190 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 STRIP2Q9ULQ0 834 aa18.71■□□□□ 0.59
DDR1-245ENST00000484556 LY6G6EA0A0G2JKS1 128 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 CLIC2O15247 247 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 LATO43561 262 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 TGM2P21980 687 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 HIST2H2BCQ6DN03 193 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 USP53Q70EK8 1073 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 PLD4Q96BZ4 506 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 TMA16Q96EY4 203 aaKnown RBP18.7■□□□□ 0.58
DDR1-245ENST00000484556 TWNKQ96RR1 684 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 ARHGAP20Q9P2F6 1191 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 ENTPD2Q9Y5L3 495 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 U3KQA8 63 aa18.7■□□□□ 0.58
DDR1-245ENST00000484556 GP1BAP07359 652 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 GOT1P17174 413 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 ST8SIA6P61647 398 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 NCOA4Q13772 614 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 RRAGBQ5VZM2 374 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 ERICH6BQ5W0A0 696 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 PRPF39Q86UA1 669 aaKnown RBP18.69■□□□□ 0.58
DDR1-245ENST00000484556 IFI44Q8TCB0 444 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 PNPLA8Q9NP80 782 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 AGPAT3Q9NRZ7 376 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 ATXN7L1Q9ULK2 861 aaPredicted RBP18.69■□□□□ 0.58
DDR1-245ENST00000484556 MAN2B2Q9Y2E5 1009 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 USP3Q9Y6I4 520 aa18.69■□□□□ 0.58
DDR1-245ENST00000484556 MAGEC1O60732 1142 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 TNFSF15O95150 251 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 STAT4Q14765 748 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 C9orf64Q5T6V5 341 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 CRTC1Q6UUV9 634 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 IQCHQ86VS3 1027 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 PLEKHO2Q8TD55 490 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 ARRDC3Q96B67 414 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 SGF29Q96ES7 293 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 CYFIP2Q96F07 1278 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 MRGPRX3Q96LB0 322 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 ZSCAN31Q96LW9 406 aaPredicted RBP18.68■□□□□ 0.58
DDR1-245ENST00000484556 MYOCQ99972 504 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 CYTH4Q9UIA0 394 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 PCDHGA8Q9Y5G5 932 aa18.68■□□□□ 0.58
DDR1-245ENST00000484556 TTC34A8MYJ7 566 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 LZTS3O60299 673 aaPredicted RBP18.67■□□□□ 0.58
DDR1-245ENST00000484556 VNN1O95497 513 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 HARS2P49590 506 aaKnown RBP18.67■□□□□ 0.58
DDR1-245ENST00000484556 METAP1P53582 386 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 TRIP4Q15650 581 aaPredicted RBP18.67■□□□□ 0.58
DDR1-245ENST00000484556 XKR5Q6UX68 686 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.67■□□□□ 0.58
DDR1-245ENST00000484556 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 ARL14Q8N4G2 192 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 UBE4BO95155 1302 aa18.67■□□□□ 0.58
DDR1-245ENST00000484556 TBL1XO60907 577 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 RTN2O75298 545 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 PIAS2O75928 621 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 NEBLO76041 1014 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 GJB6O95452 261 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 ITGB2P05107 769 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 THEGLP0DJG4 465 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 ALPPL2P10696 532 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 CSKP41240 450 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 DUSP3P51452 185 aaPredicted RBP18.66■□□□□ 0.58
DDR1-245ENST00000484556 OVGP1Q12889 678 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 SERINC3Q13530 473 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 TGIF1Q15583 401 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 RFWD3Q6PCD5 774 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
DDR1-245ENST00000484556 UNC93AQ86WB7 457 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms