RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 C8orf48Q96LL4 319 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 MYRFLQ96LU7 910 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CPXM1Q96SM3 734 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 HINFPQ9BQA5 517 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 ERP44Q9BS26 406 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 OSBPL8Q9BZF1 889 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 FAM129AQ9BZQ8 928 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 LRRC19Q9H756 370 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 NMUR1Q9HB89 426 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 TRPV4Q9HBA0 871 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 LTB4R2Q9NPC1 389 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 DMAP1Q9NPF5 467 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CYLDQ9NQC7 956 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 OSER1Q9NX31 292 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 DLGAP2Q9P1A6 1054 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 MTRF1LQ9UGC7 380 aaKnown RBP7.19□□□□□ -1.26
BRCA1-216ENST00000484087 NFU1Q9UMS0 254 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 DNAH14Q0VDD8 3507 aa7.19□□□□□ -1.26
BRCA1-216ENST00000484087 CACNA1HO95180 2353 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 TRAV19A0A0A6YYK7 116 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 KANSL1LA0AUZ9 987 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 GOLGA6BA6NDN3 693 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF840PA6NDX5 716 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 FAM170BA6NMN3 283 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 E5RJQ4 531 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 NDC80O14777 642 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 OPA1O60313 960 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 GJB6O95452 261 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 TBX18O95935 607 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ERBB2P04626 1255 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 FAM200BP0CF97 657 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 RARAP10276 462 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 RALAP11233 206 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 RDXP35241 583 aaKnown RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 RFC1P35251 1148 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 COILP38432 576 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 PLA2G4AP47712 749 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 DRG2P55039 364 aaKnown RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 STARD6P59095 220 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 TAS2R40P59535 323 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 PDE4CQ08493 712 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 USP4Q13107 963 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 CALCOCO2Q13137 446 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 FZD5Q13467 585 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 PON2Q15165 354 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 MAPRE1Q15691 268 aaKnown RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF77Q15935 545 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 CFAP58Q5T655 872 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ALS2CLQ60I27 953 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF787Q6DD87 383 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 AADACL2Q6P093 401 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 PKN3Q6P5Z2 889 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 MON1AQ86VX9 555 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 JAMLQ86YT9 394 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 SFTPA1Q8IWL2 248 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 NUP93Q8N1F7 819 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 PRELID2Q8N945 189 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ANKRD52Q8NB46 1076 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 SH3RF2Q8TEC5 729 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 DEPDC1BQ8WUY9 529 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF775Q96BV0 537 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 SPATA17Q96L03 361 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 HSFY1Q96LI6 401 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 CCDC114Q96M63 670 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 CNPY3Q9BT09 278 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 TTLL2Q9BWV7 592 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 LINC00597Q9H2U6 94 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 FBRSL1Q9HCM7 1045 aaKnown RBP7.18□□□□□ -1.26
BRCA1-216ENST00000484087 ZDHHC4Q9NPG8 344 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 GKN1Q9NS71 199 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 TDP1Q9NUW8 608 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 SIT1Q9Y3P8 196 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 CPQQ9Y646 472 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 EML5Q05BV3 1969 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 FANCMQ8IYD8 2048 aa7.18□□□□□ -1.26
BRCA1-216ENST00000484087 A0A1W2PQH9 124 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 LRRD1A4D1F6 860 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ZSCAN5CA6NGD5 496 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SPECC1L-ADORA2AF8WAN1 911 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 LEFTY2O00292 366 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CHADO15335 359 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DAPK3O43293 454 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 COCHO43405 550 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PRPSAP2O60256 369 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 OAS1P00973 400 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MYBL2P10244 700 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MBL2P11226 248 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 HDCP19113 662 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 YWHAQP27348 245 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 OAS2P29728 719 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SDC4P31431 198 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CTHP32929 405 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PTPN7P35236 360 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PCK1P35558 622 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SCNN1AP37088 669 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PLA2G5P39877 138 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 RGS7P49802 495 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms