RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 C10orf120Q5SQS8 335 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 C6orf118Q5T5N4 469 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 ARHGEF18Q6ZSZ5 1173 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 TCEAL8Q8IYN2 117 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 MCUQ8NE86 351 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 PGM2Q96G03 612 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 P2RY11Q96G91 374 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 BTN2A3PQ96KV6 586 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 CYP4F11Q9HBI6 524 aa27■■□□□ 1.91
SHOX2-204ENST00000483851 HBS1LQ9Y450 684 aaKnown RBP27■■□□□ 1.91
SHOX2-204ENST00000483851 WASH4PA8MWX3 477 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 LILRB3O75022 631 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 TSHRP16473 764 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 LSP1P33241 339 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 NRLP54845 237 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 COG7P83436 770 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 GUCY1A3Q02108 690 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 AP1B1Q10567 949 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 CCNYQ8ND76 341 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 CCDC110Q8TBZ0 833 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 SNX10Q9Y5X0 201 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 HS3ST4Q9Y661 456 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 ALPK3Q96L96 1907 aa26.99■■□□□ 1.91
SHOX2-204ENST00000483851 TLR5O60602 858 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 FGF18O76093 207 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 TMEM63AO94886 807 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 TPSB2P20231 275 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 CDK16Q00536 496 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 VEPH1Q14D04 833 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 TPSAB1Q15661 275 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ANKRD20A2Q5SQ80 823 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ANKRD20A1Q5TYW2 823 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ANKRD20A3Q5VUR7 823 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 PHOSPHO2Q8TCD6 241 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 VAT1Q99536 393 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 CCDC77Q9BR77 488 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 CENPHQ9H3R5 247 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 DNAJC17Q9NVM6 304 aaKnown RBP26.98■■□□□ 1.91
SHOX2-204ENST00000483851 PPARGC1AQ9UBK2 798 aaKnown RBP26.98■■□□□ 1.91
SHOX2-204ENST00000483851 YIPF1Q9Y548 306 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ACSL3O95573 720 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 LINC00271P0C7V0 271 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 SRGAP2BP0DMP2 458 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 CTSAP10619 480 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 HMGA1P17096 107 aaKnown RBP26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ELF1P32519 619 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 PDIA2Q13087 525 aaKnown RBP26.98■■□□□ 1.91
SHOX2-204ENST00000483851 SEMA5AQ13591 1074 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 TMEM240Q5SV17 173 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 NPWQ8N729 165 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 BCAS4Q8TDM0 211 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ZBED2Q9BTP6 218 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ZBP1Q9H171 429 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 ETNK1Q9HBU6 452 aa26.98■■□□□ 1.91
SHOX2-204ENST00000483851 MAGED2Q9UNF1 606 aaPredicted RBP26.98■■□□□ 1.91
SHOX2-204ENST00000483851 E9PAM4 449 aa26.97■■□□□ 1.91
SHOX2-204ENST00000483851 GARSP41250 739 aaKnown RBP26.97■■□□□ 1.91
SHOX2-204ENST00000483851 TUBP50607 506 aa26.97■■□□□ 1.91
SHOX2-204ENST00000483851 STAT4Q14765 748 aa26.97■■□□□ 1.91
SHOX2-204ENST00000483851 NUGGCQ68CJ6 796 aa26.97■■□□□ 1.91
SHOX2-204ENST00000483851 RWDD4Q6NW29 188 aaKnown RBP26.97■■□□□ 1.91
SHOX2-204ENST00000483851 LRRC49Q8IUZ0 686 aa26.97■■□□□ 1.91
SHOX2-204ENST00000483851 SP7Q8TDD2 431 aaPredicted RBP26.97■■□□□ 1.91
SHOX2-204ENST00000483851 NOVA2Q9UNW9 492 aaKnown RBP26.97■■□□□ 1.91
SHOX2-204ENST00000483851 RNF103O00237 685 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ATP5C1P36542 298 aaKnown RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ARTNQ5T4W7 220 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 UBAP2Q5T6F2 1119 aaKnown RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 HERVK_113Q902F9 699 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 C9orf72Q96LT7 481 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 TSGA13Q96PP4 275 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 RAD9AQ99638 391 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 STMN4Q9H169 189 aaPredicted RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 EPN3Q9H201 632 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 DNMT3LQ9UJW3 386 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 A0A087WUV0 522 aaPredicted RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 TCRBV7S3A2A0A539 114 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ZNF840PA6NDX5 716 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 RASGRF2O14827 1237 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 PPP2R2AP63151 447 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ZBED8Q8IZ13 594 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ZNF512Q96ME7 567 aaPredicted RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 SERPINB12Q96P63 405 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 PPCSQ9HAB8 311 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 EIF2B3Q9NR50 452 aaKnown RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 TRPM5Q9NZQ8 1165 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 UXTQ9UBK9 157 aaPredicted RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 RSPH14Q9UHP6 348 aa26.96■■□□□ 1.91
SHOX2-204ENST00000483851 ZMYND8Q9ULU4 1186 aaPredicted RBP26.96■■□□□ 1.91
SHOX2-204ENST00000483851 SLC12A8A0AV02 714 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 GOLGA8MH3BSY2 632 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 TBX18O95935 607 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 MOCS2O96007 188 aaPredicted RBP26.95■■□□□ 1.9
SHOX2-204ENST00000483851 HPDP32754 393 aaPredicted RBP26.95■■□□□ 1.9
SHOX2-204ENST00000483851 WASHC5Q12768 1159 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 PLD1Q13393 1074 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 PARP6Q2NL67 630 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 PIK3R6Q5UE93 754 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 RTL3Q8N8U3 475 aaKnown RBP26.95■■□□□ 1.9
SHOX2-204ENST00000483851 IGSF9Q9P2J2 1179 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms