RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 FAM3CQ92520 227 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 EPAS1Q99814 870 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 FBRSL1Q9HCM7 1045 aaKnown RBP18.39■□□□□ 0.53
CPNE1-224ENST00000483359 SHISA7A6NL88 538 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 H0Y626 953 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 STK25O00506 426 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 ALADP13716 330 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 AMPD2Q01433 879 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 IFI16Q16666 785 aaKnown RBP18.39■□□□□ 0.53
CPNE1-224ENST00000483359 BOLA3Q53S33 107 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 CCAR2Q8N163 923 aaKnown RBP18.39■□□□□ 0.53
CPNE1-224ENST00000483359 CD101Q93033 1021 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 P2RY13Q9BPV8 354 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 DEC1Q9P2X7 70 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 NEU3Q9UQ49 428 aa18.39■□□□□ 0.53
CPNE1-224ENST00000483359 LUC7L3O95232 432 aaKnown RBP18.38■□□□□ 0.53
CPNE1-224ENST00000483359 PDGFBP01127 241 aaPredicted RBP18.38■□□□□ 0.53
CPNE1-224ENST00000483359 GOT1P17174 413 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 EPHB2P29323 1055 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 L1CAMP32004 1257 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 DGKGP49619 791 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 GALK1P51570 392 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 TPI1P60174 286 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 PRKCQQ04759 706 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 KRT81Q14533 505 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 ARTNQ5T4W7 220 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 MANEALQ5VSG8 457 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 SFTPA1Q8IWL2 248 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 LRRC57Q8N9N7 239 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 TBC1D31Q96DN5 1066 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 FOXQ1Q9C009 403 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 ZYG11BQ9C0D3 744 aa18.38■□□□□ 0.53
CPNE1-224ENST00000483359 IGLV3-10A0A075B6K4 115 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 A0A1B0GVM2 712 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TCAF2A6NFQ2 919 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TNFRSF10AO00220 468 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 EEF2KO00418 725 aaKnown RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 FTCDO95954 541 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 KRT7P08729 469 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 CD48P09326 243 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 MARCKSL1P49006 195 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 CDH6P55285 790 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 SEMA3BQ13214 749 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 UBXN2BQ14CS0 331 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 FSCBQ5H9T9 825 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 MPP7Q5T2T1 576 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 ACBD5Q5T8D3 534 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TTC39BQ5VTQ0 682 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 ASTLQ6HA08 431 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 ZNF852Q6ZMS4 543 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TRIM67Q6ZTA4 783 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TEKT4Q8WW24 435 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 IRX2Q9BZI1 471 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 ARHGEF4Q9NR80 690 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 PACSIN2Q9UNF0 486 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 F5P12259 2224 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 USP27XA6NNY8 438 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 GLULP15104 373 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 HLA-FP30511 346 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 NRG1Q02297 640 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 DPYSL2Q16555 572 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 GRAMD4Q6IC98 578 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 CCDC117Q8IWD4 279 aaPredicted RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 RHOT1Q8IXI2 618 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 FLCNQ8NFG4 579 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 CALR3Q96L12 384 aaKnown RBP18.37■□□□□ 0.53
CPNE1-224ENST00000483359 PNKPQ96T60 521 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 TBC1D17Q9HA65 648 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 ABCB8Q9NUT2 735 aa18.37■□□□□ 0.53
CPNE1-224ENST00000483359 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 PI4K2BG5E9Z4 385 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 ZSCAN12O43309 604 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 KRT1P04264 644 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 CD70P32970 193 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 DNA2P51530 1060 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 CDH4P55283 916 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 C5orf22Q49AR2 442 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 PSTKQ8IV42 348 aaKnown RBP18.36■□□□□ 0.53
CPNE1-224ENST00000483359 RNF10Q8N5U6 811 aaKnown RBP18.36■□□□□ 0.53
CPNE1-224ENST00000483359 KCTD6Q8NC69 237 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 KRT35Q92764 455 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 SHDQ96IW2 340 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 CALN1Q9BXU9 219 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 EPHX3Q9H6B9 360 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 PCDH18Q9HCL0 1135 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 NDFIP2Q9NV92 336 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 CWC15Q9P013 229 aaKnown RBP18.36■□□□□ 0.53
CPNE1-224ENST00000483359 PPARGC1AQ9UBK2 798 aaKnown RBP18.36■□□□□ 0.53
CPNE1-224ENST00000483359 DNAI1Q9UI46 699 aa18.36■□□□□ 0.53
CPNE1-224ENST00000483359 MTF2Q9Y483 593 aaPredicted RBP18.36■□□□□ 0.53
CPNE1-224ENST00000483359 TECTAO75443 2155 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 ANTXRLA6NF34 631 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 MAN2B1O00754 1011 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 DAPK3O43293 454 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 CLDN11O75508 207 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 KAT7O95251 611 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 TARSP26639 723 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms