RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NADK2Q4G0N4 442 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 SEL1L3Q68CR1 1132 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 DLK2Q6UY11 383 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 RTKN2Q8IZC4 609 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.32
VPS52-218ENST00000482399 MFSD3Q96ES6 412 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 ATXN3LQ9H3M9 355 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 CNTN3Q9P232 1028 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 FETUBQ9UGM5 382 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 HACL1Q9UJ83 578 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.32
VPS52-218ENST00000482399 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 C2CD4BA6NLJ0 364 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 SPATA31C2B4DYI2 1134 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 AKAP10O43572 662 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 GRK2P25098 689 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 SPRP35270 261 aaPredicted RBP13.02□□□□□ -0.33
VPS52-218ENST00000482399 THOP1P52888 689 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 TLR1Q15399 786 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 DGKDQ16760 1214 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 KCTD21Q4G0X4 260 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
VPS52-218ENST00000482399 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 NIPA2Q8N8Q9 360 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 JADE3Q92613 823 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 SIGLEC10Q96LC7 697 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 SIK2Q9H0K1 926 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 XYLT2Q9H1B5 865 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 DPP3Q9NY33 737 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 CPSF3Q9UKF6 684 aaKnown RBP13.02□□□□□ -0.33
VPS52-218ENST00000482399 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.33
VPS52-218ENST00000482399 CD1EP15812 388 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 RALGDSQ12967 914 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 DCAF15Q66K64 600 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 POTEAQ6S8J7 498 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ARCQ7LC44 396 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 BCAP29Q9UHQ4 241 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 RUVBL2Q9Y230 463 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 RNF103-CHMP3A0A140T963 221 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ATP6AP2A0A1C7CYW4 349 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ARHGAP10A1A4S6 786 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ZBTB14O43829 449 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ATP6AP2O75787 350 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 LTFP02788 710 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 THRAP10827 490 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 FGF3P11487 239 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PSMC3P17980 439 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 RPL5P46777 297 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PPIDQ08752 370 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PTK2BQ14289 1009 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ZNF460Q14592 562 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 MYO1HQ8N1T3 1032 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 CCDC185Q8N715 623 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ZFAND2BQ8WV99 257 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 APBA2Q99767 749 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 GPAMQ9HCL2 828 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 PTPRHQ9HD43 1115 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 CHST12Q9NRB3 414 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 PCDHGB4Q9UN71 923 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 TDRKHQ9Y2W6 561 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PCDHGB5Q9Y5G0 923 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 HEMK1Q9Y5R4 338 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 CASQ2O14958 399 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 TRIM13O60858 407 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 STBD1O95210 358 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 FAM58BPP0C7Q3 252 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 PIK3R1P27986 724 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 GP5P40197 560 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 GRIA2P42262 883 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 BAG6P46379 1132 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 PLOD1Q02809 727 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 SLC10A2Q12908 348 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 TRNP1Q6NT89 227 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 CELF6Q96J87 481 aaKnown RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 PCDHAC1Q9H158 963 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 SNX25Q9H3E2 840 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 WDR41Q9HAD4 459 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 NMRAL1Q9HBL8 299 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 HOXC10Q9NYD6 342 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
VPS52-218ENST00000482399 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
VPS52-218ENST00000482399 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
VPS52-218ENST00000482399 C9JVG2 144 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms