RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OPN1MW3P0DN78 364 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 RARGP13631 454 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TNNT1P13805 278 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 RXRAP19793 462 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TNFRSF8P28908 595 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 GDI1P31150 447 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 SOX6P35712 828 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 MAGEA8P43361 318 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 MTIF2P46199 727 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 RABIFP47224 123 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 RAP2BP61225 183 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CTAG1AP78358 180 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 COG7P83436 770 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 RELQ04864 619 aaPredicted RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 GALNT2Q10471 571 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TRDNQ13061 729 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CBX3Q13185 183 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 ADCK5Q3MIX3 580 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 DNTTIP2Q5QJE6 756 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 AP1ARQ63HQ0 302 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CAVIN1Q6NZI2 390 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TMEM154Q6P9G4 183 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 ANGPTL8Q6UXH0 198 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 MARK2Q7KZI7 788 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 SGMS1Q86VZ5 419 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 PDSS2Q86YH6 399 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 C17orf53Q8N3J3 647 aaPredicted RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 GALNT4Q8N4A0 578 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CELF5Q8N6W0 485 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 FAM71DQ8N9W8 422 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 ATP11CQ8NB49 1132 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 GMCL1P1Q8NEA9 526 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TNIP2Q8NFZ5 429 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 Q8TCH9 128 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 EDAQ92838 391 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 ZC3H10Q96K80 434 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 C8orf49Q96NF6 230 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 PRAM1Q96QH2 718 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CDK5RAP1Q96SZ6 601 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 GDF15Q99988 308 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 STRA6Q9BX79 667 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CPEB1Q9BZB8 566 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 TRIM7Q9C029 511 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 KRT23Q9C075 422 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 REXO4Q9GZR2 422 aaKnown RBP4.37□□□□□ -1.71
VPS41-212ENST00000482217 ERVMER34-1Q9H9K5 563 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TM9SF3Q9HD45 589 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 MID1IP1Q9NPA3 183 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 GLRX2Q9NS18 164 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 STK32BQ9NY57 414 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 SEPT10Q9P0V9 454 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CFAP97Q9P2B7 532 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 MYO1AQ9UBC5 1043 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 EXTL2Q9UBQ6 330 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 TMEM5Q9Y2B1 443 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CYP46A1Q9Y6A2 500 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 FAM169AQ9Y6X4 670 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 KDRP35968 1356 aa4.37□□□□□ -1.71
VPS41-212ENST00000482217 CLRN2A0PK11 232 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 MYO1FO00160 1098 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 TAF4O00268 1085 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 PIP5K1BO14986 540 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 DDHD2O94830 711 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 GCNT3O95395 438 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 MATN4O95460 622 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 STAMBPO95630 424 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 NDST3O95803 873 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 FTCDO95954 541 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 SBK3P0C264 359 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 CCDC172P0C7W6 258 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 KITP10721 976 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ALADP13716 330 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ZNF20P17024 532 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 TGM1P22735 817 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 TM4SF1P30408 202 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 AKT1P31749 480 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 EIF2DP41214 584 aaKnown RBP4.36□□□□□ -1.71
VPS41-212ENST00000482217 DIO1P49895 249 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ETV1P50549 477 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 MRPS5P82675 430 aaKnown RBP4.36□□□□□ -1.71
VPS41-212ENST00000482217 YWHAHQ04917 246 aaPredicted RBP4.36□□□□□ -1.71
VPS41-212ENST00000482217 KIF5AQ12840 1032 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ZBTB17Q13105 803 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
VPS41-212ENST00000482217 NEDD9Q14511 834 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 CNGA2Q16280 664 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 CSRP2Q16527 193 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ARHGAP15Q53QZ3 475 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 KHDC1LQ5JSQ8 128 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 MPP7Q5T2T1 576 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 RBM20Q5T481 1227 aaKnown RBP4.36□□□□□ -1.71
VPS41-212ENST00000482217 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 OLFML1Q6UWY5 402 aa4.36□□□□□ -1.71
VPS41-212ENST00000482217 ZYG11AQ6WRX3 759 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms