RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR52K2Q8NGK3 314 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 TRIM7Q9C029 511 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 TKTL2Q9H0I9 626 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ZSCAN32Q9NX65 697 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 INTS6Q9UL03 887 aaKnown RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 SLC8A2Q9UPR5 921 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 SIGLEC16A6NMB1 481 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ATG13O75143 517 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CNTN5O94779 1100 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 FTLP02792 175 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CALB1P05937 261 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CCDC175P0C221 793 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 KRT3P12035 628 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 PDGFRAP16234 1089 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ABCB4P21439 1286 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CCZ1BP86790 482 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CCZ1P86791 482 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 LMAN2Q12907 356 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CRY1Q16526 586 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CDO1Q16878 200 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 FUT11Q495W5 492 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 TDRD12Q587J7 1177 aaKnown RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ANKS1BQ7Z6G8 1248 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ALYREFQ86V81 257 aaKnown RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 WDR5BQ86VZ2 330 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 FAM131BQ86XD5 332 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CARNMT1Q8N4J0 409 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 HJURPQ8NCD3 748 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CYB5D2Q8WUJ1 264 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 CENPIQ92674 756 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 SLC2A11Q9BYW1 496 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 SIK2Q9H0K1 926 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 KCND1Q9NSA2 647 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 RRN3Q9NYV6 651 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 ARHGAP20Q9P2F6 1191 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 GGA2Q9UJY4 613 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 VANGL2Q9ULK5 521 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 STAP1Q9ULZ2 295 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 NENFQ9UMX5 172 aa12.64□□□□□ -0.39
PTPRF-213ENST00000481019 EPN1Q9Y6I3 576 aaPredicted RBP12.64□□□□□ -0.39
PTPRF-213ENST00000481019 AKR1B10O60218 316 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 HOXA6P31267 233 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 RDXP35241 583 aaKnown RBP12.63□□□□□ -0.39
PTPRF-213ENST00000481019 IL12RB1P42701 662 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-213ENST00000481019 PTPN9P43378 593 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 HDAC4P56524 1084 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 ZNF252P-AS1Q0IIN9 211 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 MAMLD1Q13495 774 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 PTPRNQ16849 979 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 ALFQ53S48 1182 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 MPP7Q5T2T1 576 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 DNAJC24Q6P3W2 148 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 CHST9Q7L1S5 443 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 MFN1Q8IWA4 741 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 CCDC185Q8N715 623 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 FRMD1Q8N878 549 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 SUMF1Q8NBK3 374 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 FIBINQ8TAL6 211 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 ACDQ96AP0 544 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 TPSD1Q9BZJ3 242 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 IRF2BPLQ9H1B7 796 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 KCNF1Q9H3M0 494 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 WDCPQ9H6R7 721 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 NHEJ1Q9H9Q4 299 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-213ENST00000481019 ELOVL2Q9NXB9 296 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 THAP10Q9P2Z0 257 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-213ENST00000481019 ADAMTS1Q9UHI8 967 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 INVSQ9Y283 1065 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 PCDHGA2Q9Y5H1 932 aa12.63□□□□□ -0.39
PTPRF-213ENST00000481019 A0A087X0T9 212 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 PRR23AA6NEV1 266 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 EIF3CLB5ME19 914 aaKnown RBP12.62□□□□□ -0.39
PTPRF-213ENST00000481019 F5H5T6 163 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 FAM72CH0Y354 149 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 DCLK1O15075 740 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 RTN2O75298 545 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
PTPRF-213ENST00000481019 APBB3O95704 486 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 FAM228BP0C875 321 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 SLC2A3P11169 496 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 PABPC1P11940 636 aaKnown RBP12.62□□□□□ -0.39
PTPRF-213ENST00000481019 HLA-EP13747 358 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 GPD1P21695 349 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 PRKCHP24723 683 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
PTPRF-213ENST00000481019 NTSR1P30989 418 aa12.62□□□□□ -0.39
PTPRF-213ENST00000481019 SDC4P31431 198 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms