RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SCAPQ12770 1279 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 CCDC40Q4G0X9 1142 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 FSCBQ5H9T9 825 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 KCNT1Q5JUK3 1230 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
TRIM13-208ENST00000478111 SNX19Q92543 992 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 NUCKS1Q9H1E3 243 aaKnown RBP17.34■□□□□ 0.37
TRIM13-208ENST00000478111 STIM2Q9P246 746 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 CNTN6Q9UQ52 1028 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 NAALADL1Q9UQQ1 740 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 APOBEC2Q9Y235 224 aaKnown RBP17.34■□□□□ 0.37
TRIM13-208ENST00000478111 BTBD3Q9Y2F9 522 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 ANKRD6Q9Y2G4 727 aa17.34■□□□□ 0.37
TRIM13-208ENST00000478111 DOCK9Q9BZ29 2069 aa17.33■□□□□ 0.37
TRIM13-208ENST00000478111 C10orf142B7Z368 130 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 KCNK3O14649 394 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 DNTTP04053 509 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 IGHV4-34P06331 123 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 HOXB3P14651 431 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-208ENST00000478111 CD27P26842 260 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 CSKP41240 450 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 GRIA4P48058 902 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 STIM1Q13586 685 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 MS4A13Q5J8X5 152 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 SYPL2Q5VXT5 272 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 ZNF776Q68DI1 518 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-208ENST00000478111 FOXR2Q6PJQ5 311 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 LAYNQ6UX15 382 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 MFN1Q8IWA4 741 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 ZNF557Q8N988 423 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-208ENST00000478111 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-208ENST00000478111 RHBDD1Q8TEB9 315 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 GOLGA1Q92805 767 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 SGK2Q9HBY8 427 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 SERGEFQ9UGK8 458 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 TLR6Q9Y2C9 796 aa17.33■□□□□ 0.36
TRIM13-208ENST00000478111 FLRT2O43155 660 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 SIN3BO75182 1162 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 FSBPO95073 299 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 ATXN1LP0C7T5 689 aaKnown RBP17.32■□□□□ 0.36
TRIM13-208ENST00000478111 KCNH2Q12809 1159 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 NNTQ13423 1086 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 ARID5BQ14865 1188 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 HNRNPA1L2Q32P51 320 aaKnown RBP17.32■□□□□ 0.36
TRIM13-208ENST00000478111 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 CFAP52Q8N1V2 620 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 ADAM32Q8TC27 787 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 SERPINB11Q96P15 392 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
TRIM13-208ENST00000478111 CYTH4Q9UIA0 394 aa17.32■□□□□ 0.36
TRIM13-208ENST00000478111 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
TRIM13-208ENST00000478111 URB1O60287 2271 aaKnown RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 ASLP04424 464 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 PPP1R2P41236 205 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 CTSOP43234 321 aaPredicted RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 CTSKP43235 329 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 CETN1Q12798 172 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 EIF4EBP2Q13542 120 aaPredicted RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 MORC3Q14149 939 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 DCAF6Q58WW2 860 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 DENND1BQ6P3S1 775 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 BEND5Q7L4P6 421 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 TMPRSS7Q7RTY8 843 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 TAC4Q86UU9 113 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 KDM1BQ8NB78 822 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 CDC6Q99741 560 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 SLC4A5Q9BY07 1137 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 EBF2Q9HAK2 575 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 SCML1Q9UN30 329 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 LHX6Q9UPM6 363 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 ERVW-1Q9UQF0 538 aa17.31■□□□□ 0.36
TRIM13-208ENST00000478111 ARID1BQ8NFD5 2236 aaPredicted RBP17.31■□□□□ 0.36
TRIM13-208ENST00000478111 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 H0Y8X5 98 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 PAPSS1O43252 624 aaPredicted RBP17.3■□□□□ 0.36
TRIM13-208ENST00000478111 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
TRIM13-208ENST00000478111 IGLV3-25P01717 112 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 GALCP54803 685 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 TEAD4Q15561 434 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 PITRM1Q5JRX3 1037 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 KIAA0895LQ68EN5 471 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 DHX40Q8IX18 779 aaKnown RBP17.3■□□□□ 0.36
TRIM13-208ENST00000478111 STK32AQ8WU08 396 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 IGSF8Q969P0 613 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 FAM149B1Q96BN6 582 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 FAM129BQ96TA1 746 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 ST7Q9NRC1 585 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms