RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 NR1H3Q13133 447 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 ANO4Q32M45 955 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 ALFQ53S48 1182 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 RABGAP1LQ5R372 815 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 SYCE1Q8N0S2 351 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 PHTF2Q8N3S3 785 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 C8orf33Q9H7E9 229 aaPredicted RBP20.57■□□□□ 0.88
ACTB-210ENST00000477812 KLHL11Q9NVR0 708 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 WNT16Q9UBV4 365 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 DOCK4Q8N1I0 1966 aa20.57■□□□□ 0.88
ACTB-210ENST00000477812 A0A1B0GVM2 712 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 TCAF2A6NFQ2 919 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 C3orf70A6NLC5 250 aaPredicted RBP20.56■□□□□ 0.88
ACTB-210ENST00000477812 FTCDO95954 541 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 CD48P09326 243 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 IL4RP24394 825 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 CTNNA2P26232 953 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 HTR7P34969 479 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 GJC1P36383 396 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 ZXDAP98168 799 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 MESP2Q0VG99 397 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 SLC44A4Q53GD3 710 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 TXNDC11Q6PKC3 985 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 LRRC31Q6UY01 552 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 CHST9Q7L1S5 443 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 NLRP14Q86W24 1093 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 RALGPS2Q86X27 583 aaPredicted RBP20.56■□□□□ 0.88
ACTB-210ENST00000477812 WFDC5Q8TCV5 224 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 RAPGEF5Q92565 580 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 TBC1D31Q96DN5 1066 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 LMLNQ96KR4 655 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 EPAS1Q99814 870 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 ARHGEF3Q9NR81 526 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.56■□□□□ 0.88
ACTB-210ENST00000477812 MPP6Q9NZW5 540 aa20.56■□□□□ 0.88
ACTB-210ENST00000477812 CWC15Q9P013 229 aaKnown RBP20.56■□□□□ 0.88
ACTB-210ENST00000477812 KRBA1A5PL33 1030 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 SRGAP2O75044 1071 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 TULP3O75386 442 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 LUC7L3O95232 432 aaKnown RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 EIF2DP41214 584 aaKnown RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 HCAR3P49019 387 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 ZNF135P52742 658 aaPredicted RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 DPYSQ14117 519 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 MLF2Q15773 248 aaPredicted RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 PPP6R3Q5H9R7 873 aaPredicted RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 ASTLQ6HA08 431 aaPredicted RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 CXorf57Q6NSI4 855 aaKnown RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 PEX26Q7Z412 305 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 KATNAL2Q8IYT4 538 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 MSANTD3Q96H12 275 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 ZYG11BQ9C0D3 744 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 STIM2Q9P246 746 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 RCOR3Q9P2K3 495 aaPredicted RBP20.55■□□□□ 0.88
ACTB-210ENST00000477812 PCDHA3Q9Y5H8 950 aa20.55■□□□□ 0.88
ACTB-210ENST00000477812 CREB3O43889 395 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 CLDN11O75508 207 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 CISD3P0C7P0 127 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 RHOQP17081 205 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 GOT1P17174 413 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 EPHB2P29323 1055 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 SLC6A11P48066 632 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 PEX5P50542 639 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 CDH4P55283 916 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 CDH6P55285 790 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 DPYSL3Q14195 570 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 RFX8Q6ZV50 586 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 ZNF687Q8N1G0 1237 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 NAT16Q8N8M0 369 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 TRIM58Q8NG06 486 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 ALG3Q92685 438 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 FAF2Q96CS3 445 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 HES6Q96HZ4 224 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 CSPG4P5Q96PW8 444 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 SLC2A11Q9BYW1 496 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 TBC1D30Q9Y2I9 924 aa20.54■□□□□ 0.88
ACTB-210ENST00000477812 TYW5A2RUC4 315 aaKnown RBP20.53■□□□□ 0.88
ACTB-210ENST00000477812 GOLGA6L9A6NEM1 432 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 WASH4PA8MWX3 477 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 H3BRJ5 948 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 EEF2KO00418 725 aaKnown RBP20.53■□□□□ 0.88
ACTB-210ENST00000477812 TRIM24O15164 1050 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 DDX3YO15523 660 aaKnown RBP20.53■□□□□ 0.88
ACTB-210ENST00000477812 DCXO43602 365 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 TNNT1P13805 278 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 KDELR1P24390 212 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 HLA-FP30511 346 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 TPI1P60174 286 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 PDK2Q15119 407 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 TAZQ16635 292 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 FSCBQ5H9T9 825 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 RWDD4Q6NW29 188 aaKnown RBP20.53■□□□□ 0.88
ACTB-210ENST00000477812 TPRG1Q6ZUI0 275 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 ANKS1BQ7Z6G8 1248 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 TFAP2DQ7Z6R9 452 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 VSIG1Q86XK7 387 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 C17orf53Q8N3J3 647 aaPredicted RBP20.53■□□□□ 0.88
ACTB-210ENST00000477812 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.53■□□□□ 0.881e-24■■■□□ 16.3
ACTB-210ENST00000477812 OR52K2Q8NGK3 314 aa20.53■□□□□ 0.88
ACTB-210ENST00000477812 FIBINQ8TAL6 211 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms