RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 C11orf70Q9BRQ4 267 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 SELENOOQ9BVL4 669 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 NUP85Q9BW27 656 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 ARHGEF4Q9NR80 690 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 DNAJC17Q9NVM6 304 aaKnown RBP10.15□□□□□ -0.78
NIFK-205ENST00000477693 RRN3Q9NYV6 651 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 DEC1Q9P2X7 70 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
NIFK-205ENST00000477693 TCRBV5S1A1TA0A578 114 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 MACROD2A1Z1Q3 448 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 TMEM191CA6NGB0 347 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 ACSL4O60488 711 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 APOEP02649 317 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 CYBBP04839 570 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 RRM1P23921 792 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 HOXA6P31267 233 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 CASQ1P31415 396 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 NBL1P41271 181 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 MATKP42679 507 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 TNFRSF4P43489 277 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 CXCL12P48061 93 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 DGKGP49619 791 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 SATB1Q01826 763 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 CSTF1Q05048 431 aaKnown RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 KDSRQ06136 332 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 MPPE1Q53F39 396 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 FAM133BQ5BKY9 247 aaKnown RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 MPP7Q5T2T1 576 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 RNF43Q68DV7 783 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 PKN3Q6P5Z2 889 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 NUDT18Q6ZVK8 323 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 SFTPA1Q8IWL2 248 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 NIPA2Q8N8Q9 360 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 TERB1Q8NA31 727 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 RPLP0P6Q8NHW5 317 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 ZNF564Q8TBZ8 553 aaPredicted RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 USP33Q8TEY7 942 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 ATOH1Q92858 354 aaPredicted RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 NT5C3BQ969T7 300 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 ACDQ96AP0 544 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 PGAP3Q96FM1 320 aaPredicted RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 NPY6RQ99463 290 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 PACSIN1Q9BY11 444 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 FAM126AQ9BYI3 521 aaPredicted RBP10.14□□□□□ -0.79
NIFK-205ENST00000477693 PLK2Q9NYY3 685 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 RNF14Q9UBS8 474 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 TMEM59LQ9UK28 342 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 SLC27A6Q9Y2P4 619 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
NIFK-205ENST00000477693 DUSP10Q9Y6W6 482 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 USP34Q70CQ2 3546 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 FAM186AA6NE01 2351 aa10.14□□□□□ -0.79
NIFK-205ENST00000477693 TBC1D3BA6NDS4 549 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 K7ESF4 209 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 CES2O00748 559 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 ARHGAP33O14559 1287 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 PROSCO94903 275 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 CISD3P0C7P0 127 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 SLC2A3P11169 496 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 TCP1P17987 556 aaKnown RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 HOXD9P28356 352 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 SLC6A4P31645 630 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 CCR1P32246 355 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 GBP1P32455 592 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 KIR2DL1P43626 348 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 NRLP54845 237 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 TUBB4BP68371 445 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 MRPS21P82921 87 aaKnown RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 MTA1Q13330 715 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 SLC25A52Q3SY17 297 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 HSF5Q4G112 596 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 C2CD6Q53TS8 623 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 DNTTIP2Q5QJE6 756 aaKnown RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 PIK3R6Q5UE93 754 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 LRRC38Q5VT99 294 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 OTUD1Q5VV17 481 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 NADSYN1Q6IA69 706 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 GRAMD4Q6IC98 578 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 ZC3H14Q6PJT7 736 aaKnown RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 LRRC57Q8N9N7 239 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 ZBTB44Q8NCP5 570 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 DDI1Q8WTU0 396 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 BHMTQ93088 406 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 BTN2A3PQ96KV6 586 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 C16orf45Q96MC5 204 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 NAPGQ99747 312 aaPredicted RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 DDX50Q9BQ39 737 aaKnown RBP10.13□□□□□ -0.79
NIFK-205ENST00000477693 SLC2A11Q9BYW1 496 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIFK-205ENST00000477693 C2orf42Q9NWW7 574 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 DDIT4Q9NX09 232 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.13□□□□□ -0.79
NIFK-205ENST00000477693 AMFRQ9UKV5 643 aa10.13□□□□□ -0.79
NIFK-205ENST00000477693 STAP1Q9ULZ2 295 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms