RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 KIF2AO00139 706 aaPredicted RBP16.69■□□□□ 0.26
VHL-203ENST00000477538 KCNK3O14649 394 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 FANCGO15287 622 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 DAPK3O43293 454 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 CYBBP04839 570 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 CYP17A1P05093 508 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 PYGMP11217 842 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 ARSAP15289 507 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 EPHB2P29323 1055 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 HOXC13P31276 330 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 CASQ1P31415 396 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 HCAR3P49019 387 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 IRAK1P51617 712 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 RPS24P62847 133 aaKnown RBP16.69■□□□□ 0.26
VHL-203ENST00000477538 ZP2Q05996 745 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
VHL-203ENST00000477538 C5orf22Q49AR2 442 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 MPPE1Q53F39 396 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 LY6G5CQ5SRR4 150 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 TTC39BQ5VTQ0 682 aaPredicted RBP16.69■□□□□ 0.26
VHL-203ENST00000477538 SPOCD1Q6ZMY3 1216 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 RFX8Q6ZV50 586 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 TMEM25Q86YD3 366 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 CFAP52Q8N1V2 620 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 DDI1Q8WTU0 396 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 IRF7Q92985 503 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 TMA16Q96EY4 203 aaKnown RBP16.69■□□□□ 0.26
VHL-203ENST00000477538 CSPG4P5Q96PW8 444 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 ZYG11BQ9C0D3 744 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 CARD9Q9H257 536 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 BRD9Q9H8M2 597 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 STIM2Q9P246 746 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 ATG2BQ96BY7 2078 aa16.69■□□□□ 0.26
VHL-203ENST00000477538 DRGXA6NNA5 263 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 ZNF487B1APH4 448 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 FGF10O15520 208 aaPredicted RBP16.68■□□□□ 0.26
VHL-203ENST00000477538 TBL1XO60907 577 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 ADH1CP00326 375 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 TUBB4AP04350 444 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 ASGR2P07307 311 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 IL4RP24394 825 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CXCR5P32302 372 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CETN2P41208 172 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CDKN2BP42772 138 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 COPS2P61201 443 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 DPYSQ14117 519 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 DHCR24Q15392 516 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 PPP2R5EQ16537 467 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 ANKRD20A8PQ5CZ79 823 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 SEL1L2Q5TEA6 688 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 RHBDF2Q6PJF5 856 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CIR1Q86X95 450 aaPredicted RBP16.68■□□□□ 0.26
VHL-203ENST00000477538 SLC44A3Q8N4M1 653 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CPA6Q8N4T0 437 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 BHMTQ93088 406 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 FAF2Q96CS3 445 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 BBS2Q9BXC9 721 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 CATSPERBQ9H7T0 1116 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 HPS4Q9NQG7 708 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 MPP6Q9NZW5 540 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 MARK1Q9P0L2 795 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 SNX12Q9UMY4 172 aa16.68■□□□□ 0.26
VHL-203ENST00000477538 COL6A3P12111 3177 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 A0A1B0GVM2 712 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 TCAF2A6NFQ2 919 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 NEDD8-MDP1E9PL57 170 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ZNF500O60304 480 aaPredicted RBP16.67■□□□□ 0.26
VHL-203ENST00000477538 CNTN5O94779 1100 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ADH5P11766 374 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 RHOQP17081 205 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 AMPD1P23109 780 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 HOXD9P28356 352 aaPredicted RBP16.67■□□□□ 0.26
VHL-203ENST00000477538 TNK2Q07912 1038 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 RUNX3Q13761 415 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 LLGL1Q15334 1064 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 TAZQ16635 292 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ANO4Q32M45 955 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ALFQ53S48 1182 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 TFDP3Q5H9I0 405 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 MPP7Q5T2T1 576 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 FYB2Q5VWT5 728 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 AADACL2Q6P093 401 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 CHST9Q7L1S5 443 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ANKS1BQ7Z6G8 1248 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 PCDH19Q8TAB3 1148 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 P2RY11Q96G91 374 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 RNF157Q96PX1 679 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ASB2Q96Q27 587 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 OSBPL9Q96SU4 736 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ECT2Q9H8V3 914 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 ARHGEF4Q9NR80 690 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 PLK2Q9NYY3 685 aa16.67■□□□□ 0.26
VHL-203ENST00000477538 hCG_1818297A0A087WSY0 165 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 ARNTLO00327 626 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
VHL-203ENST00000477538 BMP1P13497 986 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 KRT10P13645 584 aa16.66■□□□□ 0.26
VHL-203ENST00000477538 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms