RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SMARCAL1Q9NZC9 954 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 TMOD2Q9NZR1 351 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 ACTR3BQ9P1U1 418 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SUCOQ9UBS9 1254 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 ZFP69BQ9UJL9 534 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 MAN1B1Q9UKM7 699 aa4.26□□□□□ -1.73
CD55-208ENST00000476590 SMG5Q9UPR3 1016 aaKnown RBP4.26□□□□□ -1.73
CD55-208ENST00000476590 PMM2O15305 246 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 ZBTB14O43829 449 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PLA2G6O60733 806 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 NDUFS2O75306 463 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PTP4A3O75365 173 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SNAPINO95295 136 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SNAP29O95721 258 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CYP3A4P08684 503 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 FAM58BPP0C7Q3 252 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SRGAP2CP0DJJ0 459 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CDH1P12830 882 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 RPS2P15880 293 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 BMP6P22004 513 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 HLA-FP30511 346 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CXCR5P32302 372 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CIITAP33076 1130 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 HTR7P34969 479 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 GP5P40197 560 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LIMK1P53667 647 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 AQP4P55087 323 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 NCKAP1LP55160 1127 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 COPZ1P61923 177 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 YWHAGP61981 247 aaKnown RBP eCLIP4.25□□□□□ -1.73
CD55-208ENST00000476590 CDK16Q00536 496 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CAP1Q01518 475 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SPAG1Q07617 926 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LGALS3BPQ08380 585 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 DHX34Q14147 1143 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 SELPLGQ14242 412 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 GALNT3Q14435 633 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SPARCL1Q14515 664 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CDK10Q15131 360 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PON2Q15165 354 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SPA17Q15506 151 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 TRADDQ15628 312 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SGCAQ16586 387 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 MEA1Q16626 185 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LRIT3Q3SXY7 679 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 METTL24Q5JXM2 366 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 C1orf146Q5VVC0 180 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 UBE2UQ5VVX9 321 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 MZT2BQ6NZ67 158 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 FBXL19Q6PCT2 694 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 DRICH1Q6PGQ1 229 aaPredicted RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 POMZP3Q6PJE2 187 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 GPR142Q7Z601 462 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 DHDDSQ86SQ9 333 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 GPR180Q86V85 440 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 TRMT44Q8IYL2 757 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 FAM26EQ8N5C1 309 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 NKAPQ8N5F7 415 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 OR5H6Q8NGV6 325 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 VANGL1Q8TAA9 524 aaPredicted RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 LRRC20Q8TCA0 184 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 SSH3Q8TE77 659 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 GANCQ8TET4 914 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 KRT35Q92764 455 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 MFSD3Q96ES6 412 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 HS6ST2Q96MM7 605 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 ZNF578Q96N58 590 aaPredicted RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 NACC1Q96RE7 527 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CSRNP1Q96S65 589 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PSMB7Q99436 277 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 BARD1Q99728 777 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 DSCC1Q9BVC3 393 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PITPNM3Q9BZ71 974 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LHX5Q9H2C1 402 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 TMEM245Q9H330 911 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 C17orf75Q9HAS0 396 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 RRAGCQ9HB90 399 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LY9Q9HBG7 655 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 MAGEE1Q9HCI5 957 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 RIC8BQ9NVN3 520 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 LIMA1Q9UHB6 759 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 CYB5R1Q9UHQ9 305 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 CNOT7Q9UIV1 285 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 APPL1Q9UKG1 709 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 RAB26Q9ULW5 256 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 ANGEL1Q9UNK9 670 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 TFR2Q9UP52 801 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 EIF3LQ9Y262 564 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 DTX4Q9Y2E6 619 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 WBP11Q9Y2W2 641 aaKnown RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 CAB39Q9Y376 341 aaPredicted RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 RIPK3Q9Y572 518 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 KLF2Q9Y5W3 355 aaPredicted RBP4.25□□□□□ -1.73
CD55-208ENST00000476590 TMEM131LA2VDJ0 1609 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 ADCY10Q96PN6 1610 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 DUOX2Q9NRD8 1548 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 PTPRUQ92729 1446 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 MAST3O60307 1309 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 TNKSO95271 1327 aa4.25□□□□□ -1.73
CD55-208ENST00000476590 ATP10BO94823 1461 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms