RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RSRC2Q7L4I2 434 aaKnown RBP16.22■□□□□ 0.19
CPSF3-203ENST00000475482 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
CPSF3-203ENST00000475482 ERICH1Q86X53 443 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 DENND1CQ8IV53 801 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 PASD1Q8IV76 773 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 ZNF513Q8N8E2 541 aaPredicted RBP16.22■□□□□ 0.19
CPSF3-203ENST00000475482 STK32AQ8WU08 396 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 CPA5Q8WXQ8 436 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 IRX2Q9BZI1 471 aaPredicted RBP16.22■□□□□ 0.19
CPSF3-203ENST00000475482 ZDHHC4Q9NPG8 344 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 CTTNBP2NLQ9P2B4 639 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 USP18Q9UMW8 372 aa16.22■□□□□ 0.19
CPSF3-203ENST00000475482 DCLK1O15075 740 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 BUB1O43683 1085 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 FOXD2O60548 495 aaPredicted RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 FBXO21O94952 628 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 LATS1O95835 1130 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 IGLV3-27P01718 113 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 FYNP06241 537 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 HMBSP08397 361 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 ZNF806P0C7X5 589 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 LCP1P13796 627 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 MMP8P22894 467 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 DGKGP49619 791 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 RGS7P49802 495 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 RSPO4Q2I0M5 234 aaPredicted RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 USP39Q53GS9 565 aaKnown RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 PRR23CQ6ZRP0 262 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 MON1BQ7L1V2 547 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 C11orf74Q86VG3 221 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 SLC35G2Q8TBE7 412 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 EDEM1Q92611 657 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 WDR24Q96S15 920 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 POLMQ9NP87 494 aaPredicted RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 PLK2Q9NYY3 685 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 CNOT8Q9UFF9 292 aaKnown RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 SFMBT1Q9UHJ3 866 aa16.21■□□□□ 0.19
CPSF3-203ENST00000475482 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 TNRC6BQ9UPQ9 1833 aaKnown RBP16.21■□□□□ 0.19
CPSF3-203ENST00000475482 PI4KAP42356 2102 aa16.21■□□□□ 0.18
CPSF3-203ENST00000475482 CEP192Q8TEP8 1941 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 A0A1W2PQF6 199 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 MTA2O94776 668 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 ALDH1A2O94788 518 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 LTFP02788 710 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 SDHBP21912 280 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 NTSR1P30989 418 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 P2RY2P41231 377 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 ENPP2Q13822 863 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 EGFLAMQ63HQ2 1017 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 PMS2CLQ68D20 193 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 RNF43Q68DV7 783 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 BEND5Q7L4P6 421 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 C1orf131Q8NDD1 294 aaKnown RBP16.2■□□□□ 0.18
CPSF3-203ENST00000475482 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 IPO4Q8TEX9 1081 aaKnown RBP16.2■□□□□ 0.18
CPSF3-203ENST00000475482 CLEC4CQ8WTT0 213 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 PIWIL1Q96J94 861 aaKnown RBP16.2■□□□□ 0.18
CPSF3-203ENST00000475482 ACOX2Q99424 681 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 GABRG3Q99928 467 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 TPSD1Q9BZJ3 242 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 PARVAQ9NVD7 372 aa16.2■□□□□ 0.18
CPSF3-203ENST00000475482 CKAP5Q14008 2032 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 RHOBTB1O94844 696 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
CPSF3-203ENST00000475482 ATXN1P54253 815 aaKnown RBP16.19■□□□□ 0.18
CPSF3-203ENST00000475482 RING1Q06587 406 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 MAP7D1Q3KQU3 841 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 DENND1BQ6P3S1 775 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 TMEM110Q86TL2 294 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 ZNF564Q8TBZ8 553 aaPredicted RBP16.19■□□□□ 0.18
CPSF3-203ENST00000475482 BHMTQ93088 406 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 C11orf70Q9BRQ4 267 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 NUP85Q9BW27 656 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 SLC2A11Q9BYW1 496 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 CYTH4Q9UIA0 394 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 SALL4Q9UJQ4 1053 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 CLEC4EQ9ULY5 219 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 CAPN6Q9Y6Q1 641 aa16.19■□□□□ 0.18
CPSF3-203ENST00000475482 NCOR2Q9Y618 2525 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 PIK3R2O00459 728 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 MSI1O43347 362 aaKnown RBP16.18■□□□□ 0.18
CPSF3-203ENST00000475482 PALMO75781 387 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 URI1O94763 535 aaPredicted RBP16.18■□□□□ 0.18
CPSF3-203ENST00000475482 GABRG2P18507 467 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 BCKDHBP21953 392 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 ACADSBP45954 432 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 GSCP56915 257 aaPredicted RBP16.18■□□□□ 0.18
CPSF3-203ENST00000475482 ELF2Q15723 593 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 GEN1Q17RS7 908 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 ADGRF1Q5T601 910 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 C11orf63Q6NUN7 778 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 MMS22LQ6ZRQ5 1243 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 DAAM2Q86T65 1068 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms