RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, human

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC38-206	ENST00000475467	SFMBT1	Q9UHJ3	866 aa		12.84	□□□□□ -0.35
TTC38-206	ENST00000475467	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
TTC38-206	ENST00000475467	RAX	Q9Y2V3	346 aa		12.84	□□□□□ -0.35
TTC38-206	ENST00000475467	DSP	P15924	2871 aa	Known RBP	12.84	□□□□□ -0.35
TTC38-206	ENST00000475467	ASXL3	Q9C0F0	2248 aa		12.84	□□□□□ -0.35
TTC38-206	ENST00000475467	FREM2	Q5SZK8	3169 aa		12.83	□□□□□ -0.35
TTC38-206	ENST00000475467	EDDM13	A0A1B0GTR0	161 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	CAPN8	A6NHC0	703 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467		H0Y8X5	98 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	ADH1B	P00325	375 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	ITGAV	P06756	1048 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	ABCB4	P21439	1286 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	C5AR1	P21730	350 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	CD38	P28907	300 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	PPP1R2	P41236	205 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	TBX4	P57082	545 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	LRRC63	Q05C16	580 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	SULT2A1	Q06520	285 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	CYP4F3	Q08477	520 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	PKDCC	Q504Y2	493 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	TCERG1L	Q5VWI1	586 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	GANC	Q8TET4	914 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	TATDN2	Q93075	761 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	GSDMA	Q96QA5	445 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	UBL7	Q96S82	380 aa	Predicted RBP	12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	OMD	Q99983	421 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	NRSN2	Q9GZP1	204 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	GDF3	Q9NR23	364 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	MAPK8IP1	Q9UQF2	711 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	TLR6	Q9Y2C9	796 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	ITIH6	Q6UXX5	1313 aa		12.83	□□□□□ -0.36
TTC38-206	ENST00000475467	WDFY3	Q8IZQ1	3526 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	P4HA2	O15460	535 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	RRP8	O43159	456 aa	Known RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	TBL1X	O60907	577 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	ZNF202	O95125	648 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	LDOC1	O95751	146 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	LTF	P02788	710 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	IGHV4-34	P06331	123 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	JUP	P14923	745 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	GOT1	P17174	413 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	ABCG1	P45844	678 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	ACADSB	P45954	432 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	RXRG	P48443	463 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	VASP	P50552	380 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	NDUFA8	P51970	172 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	GALC	P54803	685 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	CCDC15	Q0P6D6	951 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	CDH18	Q13634	790 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	CST6	Q15828	149 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	MEA1	Q16626	185 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	RNF219	Q5W0B1	726 aa	Predicted RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	LRRC69	Q6ZNQ3	347 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	IQCH	Q86VS3	1027 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	CACUL1	Q86Y37	369 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	EDEM1	Q92611	657 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	ORAI3	Q9BRQ5	295 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	HOOK1	Q9UJC3	728 aa	Known RBP	12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	BTBD3	Q9Y2F9	522 aa		12.82	□□□□□ -0.36
TTC38-206	ENST00000475467	C10orf142	B7Z368	130 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	ENC1	O14682	589 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	SLC7A4	O43246	635 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	RNGTT	O60942	597 aa	Known RBP	12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	RFPL3	O75679	317 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	CD70	P32970	193 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	FAM133B	Q5BKY9	247 aa	Known RBP	12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	FOXR2	Q6PJQ5	311 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	DSG4	Q86SJ6	1040 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	SAP25	Q8TEE9	199 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	BAP1	Q92560	729 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	MYO19	Q96H55	970 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	LRIG1	Q96JA1	1093 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	LMLN	Q96KR4	655 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	NT5C1B	Q96P26	610 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	TMEM51	Q9NW97	253 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	SLC12A6	Q9UHW9	1150 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	DMTF1	Q9Y222	760 aa		12.81	□□□□□ -0.36
TTC38-206	ENST00000475467	MUC22	E2RYF6	1773 aa	Predicted RBP	12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	TULP2	O00295	520 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	RIOK3	O14730	519 aa	Known RBP	12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	SIN3B	O75182	1162 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	RNASEH2A	O75792	299 aa	Known RBP	12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	LUC7L3	O95232	432 aa	Known RBP	12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	SMC2	O95347	1197 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	APOE	P02649	317 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	SLC2A3	P11169	496 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	LCP1	P13796	627 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	SLC8A1	P32418	973 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	CSK	P41240	450 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	RPL34	P49207	117 aa	Known RBP	12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	NUCB2	P80303	420 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	ECT2L	Q008S8	904 aa		12.8	□□□□□ -0.36
TTC38-206	ENST00000475467	E2F1	Q01094	437 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms