RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 TTC17Q96AE7 1141 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 TOE1Q96GM8 510 aaKnown RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 ZNF419Q96HQ0 510 aaPredicted RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 LMLNQ96KR4 655 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 GPR174Q9BXC1 333 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 FAM207AQ9NSI2 230 aaPredicted RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 WSB2Q9NYS7 404 aaPredicted RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 USP36Q9P275 1121 aaKnown RBP11.86□□□□□ -0.51
GPM6B-208ENST00000475307 STAP1Q9ULZ2 295 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 SLC6A14Q9UN76 642 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 CFAP54Q96N23 3096 aa11.86□□□□□ -0.51
GPM6B-208ENST00000475307 MEI4A8MW99 385 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 TM4SF5O14894 197 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 GFPT2O94808 682 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 LSM8O95777 96 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 ENGP17813 658 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 CDK11BP21127 795 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 MATKP42679 507 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 MAPK8P45983 427 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 SULT1E1P49888 294 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 COPB1P53618 953 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 MTA1Q13330 715 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 UAP1L1Q3KQV9 507 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 PITRM1Q5JRX3 1037 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 WDR45BQ5MNZ6 344 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 RABGAP1LQ5R372 815 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 FAM102AQ5T9C2 384 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 RNF219Q5W0B1 726 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 FAM124AQ86V42 546 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 SPAG5Q96R06 1193 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 PRMT1Q99873 361 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 NUP58Q9BVL2 599 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 GANQ9H2C0 597 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 FBRSQ9HAH7 460 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 NLRC4Q9NPP4 1024 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 PRSS16Q9NQE7 514 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 INTS6Q9UL03 887 aaKnown RBP11.85□□□□□ -0.51
GPM6B-208ENST00000475307 ERVW-1Q9UQF0 538 aa11.85□□□□□ -0.51
GPM6B-208ENST00000475307 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 CDX4O14627 284 aaPredicted RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 PAGE1O75459 146 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 DNTTP04053 509 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 MMEP08473 750 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 ADRB1P08588 477 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 SERPINF2P08697 491 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 GNSP15586 552 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 MAOBP27338 520 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 GABRB2P47870 512 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 RPS14P62263 151 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 C2CD6Q53TS8 623 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 TTC39BQ5VTQ0 682 aaPredicted RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 NAA35Q5VZE5 725 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 FBXL22Q6P050 247 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 SND1Q7KZF4 910 aaKnown RBP eCLIP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 CIR1Q86X95 450 aaPredicted RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 ZNF677Q86XU0 584 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 XYLT1Q86Y38 959 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 APCDD1Q8J025 514 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 NPY6RQ99463 290 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 GTPBP2Q9BX10 602 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 SIK2Q9H0K1 926 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 FSCN3Q9NQT6 498 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 SUSD2Q9UGT4 822 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 LIMA1Q9UHB6 759 aaKnown RBP11.84□□□□□ -0.51
GPM6B-208ENST00000475307 VANGL2Q9ULK5 521 aa11.84□□□□□ -0.51
GPM6B-208ENST00000475307 ZNF292O60281 2723 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 EPHB6O15197 1021 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 RNASEH1O60930 286 aaKnown RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 KCNK5O95279 499 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 IGLV3-19P01714 112 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SRPRAP08240 638 aaKnown RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 PDGFRAP16234 1089 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SOX5P35711 763 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 SCNN1AP37088 669 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 GGCXP38435 758 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 STAT1P42224 750 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 CTSOP43234 321 aaPredicted RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 NUMBP49757 651 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
GPM6B-208ENST00000475307 OXCT1P55809 520 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 NOMO3P69849 1222 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 ECT2LQ008S8 904 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 CDR2Q01850 454 aa11.83□□□□□ -0.52
GPM6B-208ENST00000475307 UBXN1Q04323 297 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms