RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ERLIN1O75477 346 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 HEXIM1O94992 359 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 IFNB1P01574 187 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ITGAVP06756 1048 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 RHOQP17081 205 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 OR1E1P30953 314 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 GBP2P32456 591 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 IFNAR2P48551 515 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MAPKAPK2P49137 400 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TERF1P54274 439 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 RBM10P98175 930 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 AP1B1Q10567 949 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 CALCOCO2Q13137 446 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 SEMA3BQ13214 749 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF177Q13360 481 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 XRCC4Q13426 336 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ADAM15Q13444 863 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 EIF4EBP2Q13542 120 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 CDH18Q13634 790 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 DPYSQ14117 519 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TAZQ16635 292 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 CYP1B1Q16678 543 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC5A9Q2M3M2 681 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ANO4Q32M45 955 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 PRSS36Q5K4E3 855 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 STXBP5Q5T5C0 1151 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 C6orf118Q5T5N4 469 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM72AQ5TYM5 149 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM72DQ6L9T8 149 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TIGD7Q6NT04 549 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 TFAP2DQ7Z6R9 452 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM72BQ86X60 149 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 IFT20Q8IY31 132 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 CELF5Q8N6W0 485 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 PLD5Q8N7P1 536 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 RTL3Q8N8U3 475 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 PRELID2Q8N945 189 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ZNF557Q8N988 423 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ZSCAN18Q8TBC5 510 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 DDI1Q8WTU0 396 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 NECTIN4Q96NY8 510 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM118BQ9BPY3 351 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC46A2Q9BY10 475 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 ADAM7Q9H2U9 754 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MTMR10Q9NXD2 777 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 GDE1Q9NZC3 331 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 SEPT10Q9P0V9 454 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 AGO1Q9UL18 857 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 HPCAL4Q9UM19 191 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 MTCH2Q9Y6C9 303 aa10.57□□□□□ -0.72
PRPF38A-202ENST00000474048 C2orf16Q68DN1 1984 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 TARSL2A2RTX5 802 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 LINC01565O15544 149 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 KCNN4O15554 427 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 TSPAN3O60637 253 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 RAMP2O60895 175 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 CLDN11O75508 207 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 GLP2RO95838 553 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 RHOCP08134 193 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 PECAM1P16284 738 aaPredicted RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 STIP1P31948 543 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 CCR2P41597 374 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 CDH4P55283 916 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 OXCT1P55809 520 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 HLTFQ14527 1009 aaKnown RBP eCLIP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 PAFAH1B3Q15102 231 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 ERCC6LQ2NKX8 1250 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 MPPE1Q53F39 396 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC45A4Q5BKX6 768 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 FBXL22Q6P050 247 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 RFWD3Q6PCD5 774 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 DRICH1Q6PGQ1 229 aaPredicted RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 C4orf22Q6V702 233 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 HTR3DQ70Z44 454 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 JAMLQ86YT9 394 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 LRRC49Q8IUZ0 686 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 ARID3BQ8IVW6 561 aaPredicted RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 TDRD5Q8NAT2 981 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 NOA1Q8NC60 698 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 BBOF1Q8ND07 529 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 NKD2Q969F2 451 aaPredicted RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 PABPC5Q96DU9 382 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 TMA16Q96EY4 203 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC22A12Q96S37 553 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 SP110Q9HB58 689 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 ANLNQ9NQW6 1124 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 TMEM248Q9NWD8 314 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 MPP6Q9NZW5 540 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms