RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.19
COPS7B-219ENST00000474042 DSPP15924 2871 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 ATRXP46100 2492 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 PAPSS1O43252 624 aaPredicted RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 IGHV4-34P06331 123 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 PPP1R2P41236 205 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 CSKP41240 450 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 CTSKP43235 329 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 GCNT1Q02742 428 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 STIM1Q13586 685 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 HNRNPA1L2Q32P51 320 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 CCDC40Q4G0X9 1142 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 USP30Q70CQ3 517 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 BEND5Q7L4P6 421 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 KDM1BQ8NB78 822 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 NUCKS1Q9H1E3 243 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 PABPC3Q9H361 631 aaKnown RBP13.89□□□□□ -0.19
COPS7B-219ENST00000474042 MTG2Q9H4K7 406 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 STIM2Q9P246 746 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 SCML1Q9UN30 329 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 CNTN6Q9UQ52 1028 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 ACACAQ13085 2346 aa13.89□□□□□ -0.19
COPS7B-219ENST00000474042 TYW5A2RUC4 315 aaKnown RBP13.88□□□□□ -0.19
COPS7B-219ENST00000474042 PCDHGA12O60330 932 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 SIN3BO75182 1162 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 ATXN1LP0C7T5 689 aaKnown RBP13.88□□□□□ -0.19
COPS7B-219ENST00000474042 CCT8P50990 548 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 MEA1Q16626 185 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 MS4A13Q5J8X5 152 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 PITRM1Q5JRX3 1037 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 KIAA0895LQ68EN5 471 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 TMPRSS7Q7RTY8 843 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 TAC4Q86UU9 113 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 ELOA2Q8IYF1 753 aaPredicted RBP13.88□□□□□ -0.19
COPS7B-219ENST00000474042 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 MIS12Q9H081 205 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 SERGEFQ9UGK8 458 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 HOOK1Q9UJC3 728 aaKnown RBP13.88□□□□□ -0.19
COPS7B-219ENST00000474042 GPSM3Q9Y4H4 160 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 BAHCC1Q9P281 2608 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 ITPR1Q14643 2758 aa13.88□□□□□ -0.19
COPS7B-219ENST00000474042 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 H0Y8X5 98 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
COPS7B-219ENST00000474042 FSBPO95073 299 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 LUC7L3O95232 432 aaKnown RBP13.87□□□□□ -0.19
COPS7B-219ENST00000474042 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 BMP6P22004 513 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 GRK6P43250 576 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 GPD2P43304 727 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 ST8SIA6P61647 398 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 CDH18Q13634 790 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 CST6Q15828 149 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 FSCBQ5H9T9 825 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 RRAGAQ7L523 313 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 RHBDD1Q8TEB9 315 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 CCDC86Q9H6F5 360 aaKnown RBP13.87□□□□□ -0.19
COPS7B-219ENST00000474042 DKK4Q9UBT3 224 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 ADAMTS1Q9UHI8 967 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 NAALADL1Q9UQQ1 740 aa13.87□□□□□ -0.19
COPS7B-219ENST00000474042 A0A1W2PPC4 97 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 TARSL2A2RTX5 802 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 PPP1R3GB7ZBB8 358 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 VILLO15195 856 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 MID1O15344 667 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 CTSOP43234 321 aaPredicted RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 ACADSBP45954 432 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 GALCP54803 685 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 MARSP56192 900 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 RACK1P63244 317 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 CETN1Q12798 172 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 DCAF6Q58WW2 860 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 C9orf64Q5T6V5 341 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 ISM2Q6H9L7 571 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 DENND1BQ6P3S1 775 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 MMS22LQ6ZRQ5 1243 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 SCUBE3Q8IX30 993 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 CARNMT1Q8N4J0 409 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 MDM1Q8TC05 714 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 ADAM32Q8TC27 787 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 NELFBQ8WX92 580 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 FAM149B1Q96BN6 582 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 SLC6A18Q96N87 628 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 TRIM62Q9BVG3 475 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 FBXL12Q9NXK8 326 aa13.86□□□□□ -0.19
COPS7B-219ENST00000474042 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
COPS7B-219ENST00000474042 FZD4Q9ULV1 537 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms