RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SGSHP51688 502 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF445P59923 1031 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 YWHAGP61981 247 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 AMPD3Q01432 767 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 CUL4AQ13619 759 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 KCNJ12Q14500 433 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 TRIP4Q15650 581 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 TBC1D25Q3MII6 688 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 MPPE1Q53F39 396 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 RAB41Q5JT25 222 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 C1orf220Q5T0J3 134 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PPP1R26Q5T8A7 1209 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SFMBT2Q5VUG0 894 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ZNF776Q68DI1 518 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 KIAA0895LQ68EN5 471 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 NCEH1Q6PIU2 408 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 USP30Q70CQ3 517 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SV2AQ7L0J3 742 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 CHST9Q7L1S5 443 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 BHLHA9Q7RTU4 235 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ERICH1Q86X53 443 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SLC9A9Q8IVB4 645 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SPACA3Q8IXA5 215 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 ARHGAP18Q8N392 663 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 EID2Q8N6I1 236 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 IQUBQ8NA54 791 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 WFDC5Q8TCV5 224 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 TMEM174Q8WUU8 243 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 RFFLQ8WZ73 363 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 GOLGA1Q92805 767 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 FGF11Q92914 225 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PLD4Q96BZ4 506 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 DHX58Q96C10 678 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 MYO19Q96H55 970 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 RSPH9Q9H1X1 276 aaPredicted RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PABPC3Q9H361 631 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 CYP3A43Q9HB55 503 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 SERGEFQ9UGK8 458 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 GGA2Q9UJY4 613 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 STOML2Q9UJZ1 356 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 PLA2G4CQ9UP65 541 aa5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 FCF1Q9Y324 198 aaKnown RBP5.35□□□□□ -1.55
SNRNP40-204ENST00000474025 UNC79Q9P2D8 2635 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 A0A1W2PR77 199 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 WNT9AO14904 365 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 IKBKBO14920 756 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 MID1O15344 667 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 PPP6R2O75170 966 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 KIF20AO95235 890 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 LATS1O95835 1130 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 ATP5BP06576 529 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 PDIA4P13667 645 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CD38P28907 300 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CD70P32970 193 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 RXRGP48443 463 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 HARS2P49590 506 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 GALCP54803 685 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 UCNP55089 124 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 NXPH1P58417 271 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CXADRP78310 365 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 RHDQ02161 417 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CCDC173Q0VFZ6 552 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 ILKQ13418 452 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CUL4BQ13620 913 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 STK38Q15208 465 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CST6Q15828 149 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 HNRNPA1L2Q32P51 320 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 MBLAC2Q68D91 279 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 PM20D1Q6GTS8 502 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 SHC4Q6S5L8 630 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 RSRC2Q7L4I2 434 aaKnown RBP5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 KANSL1Q7Z3B3 1105 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 PIGZQ86VD9 579 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 FMNL3Q8IVF7 1028 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 CACTIN-AS1Q8N1I8 211 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 DCBLD1Q8N8Z6 715 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 LINC00301Q8NCQ3 95 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 KIAA0895Q8NCT3 520 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 OR2T34Q8NGX1 318 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 TAS1R2Q8TE23 839 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 SKA1Q96BD8 255 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 TMEM176AQ96HP8 235 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 HIC2Q96JB3 615 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 LMLNQ96KR4 655 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 SEMA4CQ9C0C4 833 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 NIF3L1Q9GZT8 377 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 BLZF1Q9H2G9 400 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 KCTD10Q9H3F6 313 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 MAGEF1Q9HAY2 307 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 GDF3Q9NR23 364 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 AASDHPPTQ9NRN7 309 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 FBXL12Q9NXK8 326 aa5.34□□□□□ -1.55
SNRNP40-204ENST00000474025 ADAMTS1Q9UHI8 967 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms