RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NCAPGQ9BPX3 1015 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 CLEC4EQ9ULY5 219 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 PCDHGA2Q9Y5H1 932 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 MYOFQ9NZM1 2061 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 A0A1B0GVM2 712 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 TCRBV5S1A1TA0A578 114 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 TCAF2A6NFQ2 919 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 CCP110O43303 1012 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 CLDN11O75508 207 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 APBB3O95704 486 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 HNRNPLP14866 589 aaKnown RBP eCLIP14.19□□□□□ -0.14
USF1-205ENST00000473969 HLA-FP30511 346 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 ADRA1BP35368 520 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 WASP42768 502 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 ST8SIA6P61647 398 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
USF1-205ENST00000473969 STARD3Q14849 445 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 CRY1Q16526 586 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 EFHC2Q5JST6 749 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 SH3PXD2AQ5TCZ1 1133 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 EGFLAMQ63HQ2 1017 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 HEATR6Q6AI08 1181 aaKnown RBP14.19□□□□□ -0.14
USF1-205ENST00000473969 BNIPLQ7Z465 357 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 DNAAF5Q86Y56 855 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
USF1-205ENST00000473969 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.19□□□□□ -0.14
USF1-205ENST00000473969 OLIG1Q8TAK6 271 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 P2RY11Q96G91 374 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 HHIPQ96QV1 700 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 ADAM33Q9BZ11 813 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 FAM86C1Q9NVL1 165 aa14.19□□□□□ -0.14
USF1-205ENST00000473969 BCCIPQ9P287 314 aaKnown RBP eCLIP14.19□□□□□ -0.14
USF1-205ENST00000473969 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 SGK1O00141 431 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 SYNCRIPO60506 623 aaKnown RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 HOXB2P14652 356 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 HOXA6P31267 233 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 CD70P32970 193 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 GGCXP38435 758 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 FNTBP49356 437 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 AIF1P55008 147 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 CDH4P55283 916 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 HDAC4P56524 1084 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 GFPT1Q06210 699 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 LMAN2Q12907 356 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 TBX2Q13207 712 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 FNDC3BQ53EP0 1204 aaKnown RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 RNF219Q5W0B1 726 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 MBLAC2Q68D91 279 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 CIR1Q86X95 450 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 PGBD3Q8N328 593 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 CTNNBL1Q8WYA6 563 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 IGSF8Q969P0 613 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 MYEOVQ96EZ4 313 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 THAP2Q9H0W7 228 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 SEMA4AQ9H3S1 761 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 NHEJ1Q9H9Q4 299 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 ZDHHC4Q9NPG8 344 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 THAP10Q9P2Z0 257 aaPredicted RBP14.18□□□□□ -0.14
USF1-205ENST00000473969 OR12D3Q9UGF7 316 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 R4GN57 208 aa14.18□□□□□ -0.14
USF1-205ENST00000473969 CCDC163A0A0D9SF12 145 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 TMEM191CA6NGB0 347 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 E9PAM4 449 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 K7ESF4 209 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 AXIN1O15169 862 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 ASLP04424 464 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 DLDP09622 509 aaKnown RBP14.17□□□□□ -0.14
USF1-205ENST00000473969 H2AFZP0C0S5 128 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 CNR2P34972 360 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 NNMTP40261 264 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 ACAP1Q15027 740 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 RWDD4Q6NW29 188 aaKnown RBP14.17□□□□□ -0.14
USF1-205ENST00000473969 SERPINA13PQ6UXR4 307 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 H2AFVQ71UI9 128 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 C14orf80Q86SX3 495 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 FNIP1Q8TF40 1166 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 NTAN1Q96AB6 310 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 CHP1Q99653 195 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 TMPRSS4Q9NRS4 437 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 POLR3BQ9NW08 1133 aaPredicted RBP14.17□□□□□ -0.14
USF1-205ENST00000473969 C2orf42Q9NWW7 574 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 CACNA2D2Q9NY47 1150 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 RAB23Q9ULC3 237 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 SNX10Q9Y5X0 201 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 STON1Q9Y6Q2 735 aa14.17□□□□□ -0.14
USF1-205ENST00000473969 TCRBV21S2A2A0A5A6 115 aa14.16□□□□□ -0.14
USF1-205ENST00000473969 ANTXRLA6NF34 631 aa14.16□□□□□ -0.14
USF1-205ENST00000473969 DRGXA6NNA5 263 aa14.16□□□□□ -0.14
USF1-205ENST00000473969 MYO1FO00160 1098 aa14.16□□□□□ -0.14
USF1-205ENST00000473969 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms