RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 EIF3CQ99613 913 aaKnown RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 CIPCQ9C0C6 399 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 OR12D3Q9UGF7 316 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 PCSK1NQ9UHG2 260 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 GGA2Q9UJY4 613 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 INTUQ9ULD6 942 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 FZD10Q9ULW2 581 aa12.81□□□□□ -0.36
DDX56-209ENST00000473924 EPN1Q9Y6I3 576 aaPredicted RBP12.81□□□□□ -0.36
DDX56-209ENST00000473924 KMT2EQ8IZD2 1858 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 PRRT4C9JH25 899 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 CLDN11O75508 207 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 LCA5LO95447 670 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 MIPP30301 263 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 HLA-FP30511 346 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 NUBP1P53384 320 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 CDH4P55283 916 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 MRPS21P82921 87 aaKnown RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 SCAPQ12770 1279 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 GEN1Q17RS7 908 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 EMC10Q5UCC4 262 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 RWDD4Q6NW29 188 aaKnown RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 CHST9Q7L1S5 443 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 C1orf210Q8IVY1 113 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 RHOT2Q8IXI1 618 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 AHI1Q8N157 1196 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 SPEM1Q8N4L4 309 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 SLC35G2Q8TBE7 412 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 WFIKKN2Q8TEU8 576 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ACDQ96AP0 544 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ZYG11BQ9C0D3 744 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 OSBPL2Q9H1P3 480 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 OSGEPQ9NPF4 335 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 KIAA1522Q9P206 1035 aaPredicted RBP12.8□□□□□ -0.36
DDX56-209ENST00000473924 LCMT1Q9UIC8 334 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 PCDHA13Q9Y5I0 950 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 ZDBF2Q9HCK1 2354 aa12.8□□□□□ -0.36
DDX56-209ENST00000473924 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 GALR2O43603 387 aaPredicted RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 TIMM44O43615 452 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 CREB3O43889 395 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 LRCH4O75427 683 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 MOCS3O95396 460 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 CD70P32970 193 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 PCK1P35558 622 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 CXCL12P48061 93 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 IRAK1P51617 712 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 CCR3P51677 355 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 OXCT1P55809 520 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 LMAN2Q12907 356 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 GAS6Q14393 721 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 EIF4HQ15056 248 aaKnown RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 E2F5Q15329 346 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 C5orf22Q49AR2 442 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 FSCBQ5H9T9 825 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 ERMARDQ5T6L9 678 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 DAB2IPQ5VWQ8 1189 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 RNF43Q68DV7 783 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 SDE2Q6IQ49 451 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 RAD9BQ6WBX8 426 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 TRMT11Q7Z4G4 463 aaKnown RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 TFAP2DQ7Z6R9 452 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 CHPFQ8IZ52 775 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 NIPA2Q8N8Q9 360 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 USP33Q8TEY7 942 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 RFFLQ8WZ73 363 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 PPP1R9BQ96SB3 815 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 PRRX2Q99811 253 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 EPAS1Q99814 870 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 DHX35Q9H5Z1 703 aaKnown RBP12.79□□□□□ -0.36
DDX56-209ENST00000473924 ZDHHC4Q9NPG8 344 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 ELOVL2Q9NXB9 296 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 MPP6Q9NZW5 540 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 AP4E1Q9UPM8 1137 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
DDX56-209ENST00000473924 IGLV3-10A0A075B6K4 115 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ANTXRLA6NF34 631 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 DRGXA6NNA5 263 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 CHURC1-FNTBB4DL54 471 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 FAM72CH0Y354 149 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 NRDCO43847 1150 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 CNTN5O94779 1100 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 LRIG2O94898 1065 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 ATP5BP06576 529 aaKnown RBP12.78□□□□□ -0.36
DDX56-209ENST00000473924 OR1E1P30953 314 aa12.78□□□□□ -0.36
DDX56-209ENST00000473924 L1CAMP32004 1257 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms