RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 AHI1Q8N157 1196 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 WFIKKN2Q8TEU8 576 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 CYB5D2Q8WUJ1 264 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 CPLX3Q8WVH0 158 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 HMGB4Q8WW32 186 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 SELENOOQ9BVL4 669 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 WDCPQ9H6R7 721 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 POLMQ9NP87 494 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 INTS6Q9UL03 887 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 VANGL2Q9ULK5 521 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 CAPN11Q9UMQ6 739 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 SPAG17Q6Q759 2223 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 RIF1Q5UIP0 2472 aaKnown RBP19.57■□□□□ 0.72
PTCD3-210ENST00000473829 PLXND1Q9Y4D7 1925 aa19.57■□□□□ 0.72
PTCD3-210ENST00000473829 ITIH6Q6UXX5 1313 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 FAM186AA6NE01 2351 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 DCLK1O15075 740 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 ENDOD1O94919 500 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 F9P00740 461 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 KRT3P12035 628 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 PDGFRAP16234 1089 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 GABRG2P18507 467 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 RRM1P23921 792 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 PRKCHP24723 683 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 CDH18Q13634 790 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 PTPRNQ16849 979 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 CDO1Q16878 200 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 PPP1R15BQ5SWA1 713 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 MBLAC2Q68D91 279 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 FAM131BQ86XD5 332 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 ZNF683Q8IZ20 524 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 CCAR2Q8N163 923 aaKnown RBP19.56■□□□□ 0.72
PTCD3-210ENST00000473829 UCMAQ8WVF2 138 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 RPRD1AQ96P16 312 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-210ENST00000473829 SIK2Q9H0K1 926 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
PTCD3-210ENST00000473829 ATMINO43313 823 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-210ENST00000473829 SDC4P31431 198 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 PTPN9P43378 593 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 NUMBP49757 651 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 ZBED6P86452 979 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 SDE2Q6IQ49 451 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 CXorf57Q6NSI4 855 aaKnown RBP19.55■□□□□ 0.72
PTCD3-210ENST00000473829 DNAJC24Q6P3W2 148 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 WDR59Q6PJI9 974 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 CEP68Q76N32 757 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 SND1Q7KZF4 910 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTCD3-210ENST00000473829 DCLK2Q8N568 766 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 SLC6A17Q9H1V8 727 aa19.55■□□□□ 0.72
PTCD3-210ENST00000473829 BCCIPQ9P287 314 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTCD3-210ENST00000473829 DOCK4Q8N1I0 1966 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 A0A1B0GVM2 712 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 TCAF2A6NFQ2 919 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 H0Y626 953 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 TIMM44O43615 452 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 ALDH1A2O94788 518 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 PLEKP08567 350 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 HLA-EP13747 358 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 NDUFV2P19404 249 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 GPD1P21695 349 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 CASP14P31944 242 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 HDAC4P56524 1084 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 RPL7AP62424 266 aaKnown RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 MTA1Q13330 715 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 C5orf22Q49AR2 442 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 TDRD12Q587J7 1177 aaKnown RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 RABGAP1LQ5R372 815 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 TTC39BQ5VTQ0 682 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 KBTBD6Q86V97 674 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 FAM160A2Q8N612 972 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 ZNF366Q8N895 744 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 ZNF557Q8N988 423 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 OR52K2Q8NGK3 314 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 RLN3Q8WXF3 142 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 CENPIQ92674 756 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 MCEEQ96PE7 176 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 EP300Q09472 2414 aaPredicted RBP19.54■□□□□ 0.72
PTCD3-210ENST00000473829 GVINP1Q7Z2Y8 2422 aa19.54■□□□□ 0.72
PTCD3-210ENST00000473829 NPC1O15118 1278 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 AP5Z1O43299 807 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CCP110O43303 1012 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CNTN5O94779 1100 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 BCKDHBP21953 392 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CSKP41240 450 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
PTCD3-210ENST00000473829 OGDHQ02218 1023 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 PITRM1Q5JRX3 1037 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 SERPINA13PQ6UXR4 307 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 STRADAQ7RTN6 431 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 APCDD1Q8J025 514 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 FRMD1Q8N878 549 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 FAM172AQ8WUF8 416 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 SYN2Q92777 582 aaPredicted RBP19.53■□□□□ 0.72
PTCD3-210ENST00000473829 TTC17Q96AE7 1141 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 IQCDQ96DY2 449 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 MYO19Q96H55 970 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 TMEM245Q9H330 911 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 CD93Q9NPY3 652 aa19.53■□□□□ 0.72
PTCD3-210ENST00000473829 LUC7L2Q9Y383 392 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms