RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 CCDC185Q8N715 623 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 ATP6V0D2Q8N8Y2 350 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 NELL1Q92832 810 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 RNF34Q969K3 372 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 WBP2Q969T9 261 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 CHFRQ96EP1 664 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 BTN2A3PQ96KV6 586 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 WDR24Q96S15 920 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 SNRNP25Q9BV90 132 aaKnown RBP9.41□□□□□ -0.9
SMG5-203ENST00000473643 CHRDQ9H2X0 955 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 SEMA4AQ9H3S1 761 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 HPS4Q9NQG7 708 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 SPATA6Q9NWH7 488 aaPredicted RBP9.41□□□□□ -0.9
SMG5-203ENST00000473643 DDX56Q9NY93 547 aaKnown RBP9.41□□□□□ -0.9
SMG5-203ENST00000473643 PCSK1NQ9UHG2 260 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 NDRG2Q9UN36 371 aaKnown RBP9.41□□□□□ -0.9
SMG5-203ENST00000473643 ZNF510Q9Y2H8 683 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMG5-203ENST00000473643 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
SMG5-203ENST00000473643 SYNJ2BP-COX16A0A087WUM0 186 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 PRR23AA6NEV1 266 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 GFRA2O00451 464 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 FANCGO15287 622 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 LAMTOR5O43504 91 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 GFRA3O60609 400 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 PAGE1O75459 146 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ZRANB2O95218 330 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMG5-203ENST00000473643 IL4RP24394 825 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 L1CAMP32004 1257 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 HTR7P34969 479 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 SSR1P43307 286 aaKnown RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 HCAR3P49019 387 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 SLC11A2P49281 568 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 RWDD2BP57060 319 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 USP4Q13107 963 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 SEMA3BQ13214 749 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 RUNX3Q13761 415 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 CCINQ13939 588 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 GAS6Q14393 721 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 PDK2Q15119 407 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 TAZQ16635 292 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 C5orf22Q49AR2 442 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ATP13A4Q4VNC1 1196 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 KCNT1Q5JUK3 1230 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 TRIM68Q6AZZ1 485 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ASCL5Q7RTU5 278 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 RCOR2Q8IZ40 523 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 SYNPOQ8N3V7 929 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 UBL4BQ8N7F7 174 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 EXD1Q8NHP7 514 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 TTC8Q8TAM2 541 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 SH3RF2Q8TEC5 729 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 OSCP1Q8WVF1 389 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ALG3Q92685 438 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 KRT35Q92764 455 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 NKD2Q969F2 451 aaPredicted RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 PRMT1Q99873 361 aaKnown RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 CARD9Q9H257 536 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 EBF3Q9H4W6 596 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 PRMT8Q9NR22 394 aaPredicted RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 SMPD4Q9NXE4 827 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 COX16Q9P0S2 106 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 CFAP97Q9P2B7 532 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 RCOR3Q9P2K3 495 aaPredicted RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 LSM7Q9UK45 103 aaKnown RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 AGO1Q9UL18 857 aaKnown RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 AP4E1Q9UPM8 1137 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 HS3ST4Q9Y661 456 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ZNF292O60281 2723 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.9
SMG5-203ENST00000473643 FRYLO94915 3013 aa9.4□□□□□ -0.9
SMG5-203ENST00000473643 IGLV3-10A0A075B6K4 115 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CTAGE9A4FU28 777 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 C3orf70A6NLC5 250 aaPredicted RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 DRGXA6NNA5 263 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CES2O00748 559 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ENC1O14682 589 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 TRDMT1O14717 391 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 ATP1A1P05023 1023 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 HMBSP08397 361 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 TDGF1P13385 188 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ARSAP15289 507 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 KDELR1P24390 212 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CORO1AP31146 461 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 MARCKSL1P49006 195 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 COPS2P61201 443 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 AMPD2Q01433 879 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CSTF1Q05048 431 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 LRRC32Q14392 662 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 CA9Q16790 459 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 EML3Q32P44 896 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
SMG5-203ENST00000473643 MS4A13Q5J8X5 152 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 DGKKQ5KSL6 1271 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 ADGRF1Q5T601 910 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 PIK3R6Q5UE93 754 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 MANEALQ5VSG8 457 aa9.39□□□□□ -0.91
SMG5-203ENST00000473643 NADSYN1Q6IA69 706 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms