RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 SKA1Q96BD8 255 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 MYO19Q96H55 970 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 BTN2A3PQ96KV6 586 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 THAP9Q9H5L6 903 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 C6orf106Q9H6K1 298 aaPredicted RBP14.04□□□□□ -0.16
CHD3-209ENST00000473376 POPDC2Q9HBU9 364 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.04□□□□□ -0.16
CHD3-209ENST00000473376 ITIH6Q6UXX5 1313 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 ZZEF1O43149 2961 aa14.04□□□□□ -0.16
CHD3-209ENST00000473376 IGF2RP11717 2491 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 VILLO15195 856 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 IGLV3-25P01717 112 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
CHD3-209ENST00000473376 CDK4P11802 303 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 BMP6P22004 513 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 BRD2P25440 801 aaKnown RBP14.03□□□□□ -0.16
CHD3-209ENST00000473376 SGSHP51688 502 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 PLK1P53350 603 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 YWHAZP63104 245 aaKnown RBP14.03□□□□□ -0.16
CHD3-209ENST00000473376 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 CDH18Q13634 790 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 NADSYN1Q6IA69 706 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 RFWD3Q6PCD5 774 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 PROSER1Q86XN7 944 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 SCUBE3Q8IX30 993 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 BIRC7Q96CA5 298 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 ERLEC1Q96DZ1 483 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 PRICKLE1Q96MT3 831 aaPredicted RBP14.03□□□□□ -0.16
CHD3-209ENST00000473376 KREMEN1Q96MU8 473 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 PABPC3Q9H361 631 aaKnown RBP14.03□□□□□ -0.16
CHD3-209ENST00000473376 TM9SF3Q9HD45 589 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHD3-209ENST00000473376 ASNSD1Q9NWL6 643 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 SLC12A6Q9UHW9 1150 aa14.03□□□□□ -0.16
CHD3-209ENST00000473376 MUC22E2RYF6 1773 aaPredicted RBP14.02□□□□□ -0.16
CHD3-209ENST00000473376 EDDM13A0A1B0GTR0 161 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 A0A1W2PPC4 97 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 GTPBP10A4D1E9 387 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 LRRC72A6NJI9 287 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 E9PAM4 449 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 CAPN9O14815 690 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 YKT6O15498 198 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 LUC7L3O95232 432 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 APOEP02649 317 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 NUDT1P36639 197 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 CSKP41240 450 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 GRK6P43250 576 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 CSNK1EP49674 416 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 CCR5P51681 352 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 SNX16P57768 344 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 PAK1Q13153 545 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 KIF19Q2TAC6 998 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 C9orf64Q5T6V5 341 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 KIAA0895LQ68EN5 471 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 RRAGAQ7L523 313 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 TMPRSS7Q7RTY8 843 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 GALNT15Q8N3T1 639 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 WFDC5Q8TCV5 224 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 SETD7Q8WTS6 366 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 CLEC4CQ8WTT0 213 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 ZNF606Q8WXB4 792 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 KAT5Q92993 513 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 FAM149B1Q96BN6 582 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 MRGPRX3Q96LB0 322 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 CAMK1GQ96NX5 476 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 ORAI3Q9BRQ5 295 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 KDM4CQ9H3R0 1056 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 TJP2Q9UDY2 1190 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 INTS6Q9UL03 887 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 ANKRD6Q9Y2G4 727 aa14.02□□□□□ -0.17
CHD3-209ENST00000473376 FNDC3AQ9Y2H6 1198 aaKnown RBP14.02□□□□□ -0.17
CHD3-209ENST00000473376 GOLGA6L7A0A1B0GV03 622 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 A0A1B0GVT2 93 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 TNFSF14O43557 240 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ADH1BP00325 375 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 C5AR1P21730 350 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 NNMTP40261 264 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 CTSKP43235 329 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 CCT8P50990 548 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 RPS24P62847 133 aaKnown RBP14.01□□□□□ -0.17
CHD3-209ENST00000473376 ECT2LQ008S8 904 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ELAVL3Q14576 367 aaKnown RBP14.01□□□□□ -0.17
CHD3-209ENST00000473376 CST6Q15828 149 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 DCAF6Q58WW2 860 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 PITRM1Q5JRX3 1037 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ACBD5Q5T8D3 534 aaPredicted RBP14.01□□□□□ -0.17
CHD3-209ENST00000473376 FAM124AQ86V42 546 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ARHGEF19Q8IW93 802 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 OR2T34Q8NGX1 318 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 RHBDD1Q8TEB9 315 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
CHD3-209ENST00000473376 FAM131CQ96AQ9 280 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 MIS12Q9H081 205 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 INTS2Q9H0H0 1204 aaKnown RBP14.01□□□□□ -0.17
CHD3-209ENST00000473376 IL21RQ9HBE5 538 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 TOR4AQ9NXH8 423 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 FBXL12Q9NXK8 326 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 ERVW-1Q9UQF0 538 aa14.01□□□□□ -0.17
CHD3-209ENST00000473376 NAALADL1Q9UQQ1 740 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms