RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TMEM216Q9P0N5 145 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 DCDC2Q9UHG0 476 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 CDH22Q9UJ99 828 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 USP12O75317 370 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 ITGA2BP08514 1039 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 ERVK-10P10266 1014 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 MLH1P40692 756 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 ADCYAP1R1P41586 468 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 NR2C2P49116 596 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 HNRNPDQ14103 355 aaKnown RBP21.67■■□□□ 1.06
COL18A1-207ENST00000473212 MAMDC4Q6UXC1 1216 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 CMC1Q7Z7K0 106 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 COLGALT1Q8NBJ5 622 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 HTR3CQ8WXA8 447 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 GOLGA2P5Q9HBQ8 144 aa21.67■■□□□ 1.06
COL18A1-207ENST00000473212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 ZMPSTE24O75844 475 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 CYP2C8P10632 490 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 ZFXP17010 805 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 AKAP5P24588 427 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 GSTT1P30711 240 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 PGGT1BP53609 377 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 PGM2L1Q6PCE3 622 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 DEFB107AQ8IZN7 70 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 AZIN2Q96A70 460 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 DNAJC28Q9NX36 388 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 SYBUQ9NX95 663 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 USP3Q9Y6I4 520 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 SPTLC1O15269 473 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 DDNO94850 711 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 IGFBP6P24592 240 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 PSMB4P28070 264 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 CDK7P50613 346 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 CNPY1Q3B7I2 92 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 TCHHL1Q5QJ38 904 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 MARCH8Q5T0T0 291 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 ACAD11Q709F0 780 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 PHTF2Q8N3S3 785 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 NLGN2Q8NFZ4 835 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 ACTRT2Q8TDY3 377 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 TFB1MQ8WVM0 346 aaKnown RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 FAM49AQ9H0Q0 323 aaPredicted RBP21.66■■□□□ 1.06
COL18A1-207ENST00000473212 KLK14Q9P0G3 267 aa21.66■■□□□ 1.06
COL18A1-207ENST00000473212 ZNF195O14628 629 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 PEX2P28328 305 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 HOXA11P31270 313 aaPredicted RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 AQP4P55087 323 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 MSLNQ13421 630 aaPredicted RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ITGA9Q13797 1035 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ZNF484Q5JVG2 852 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 HPS6Q86YV9 775 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 HACE1Q8IYU2 909 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 GDPD5Q8WTR4 605 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 KLHL4Q9C0H6 718 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 NXF3Q9H4D5 531 aaKnown RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 COPG2Q9UBF2 871 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 MORF4L1Q9UBU8 362 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 A0A0A0MRY4 1105 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ZNF487B1APH4 448 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 RALBP11234 206 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ITGAXP20702 1163 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 TKTP29401 623 aaKnown RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ABCE1P61221 599 aaKnown RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 CUL3Q13618 768 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 TAPT1Q6NXT6 567 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 CENPIQ92674 756 aaPredicted RBP21.65■■□□□ 1.06
COL18A1-207ENST00000473212 SPATA13Q96N96 652 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 C16orf70Q9BSU1 422 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 ZDHHC7Q9NXF8 308 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 POMPQ9Y244 141 aa21.65■■□□□ 1.06
COL18A1-207ENST00000473212 RNF103O00237 685 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 SLC25A27O95847 323 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 GRK2P25098 689 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 TYK2P29597 1187 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 SERPINB6P35237 376 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 BTKQ06187 659 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 LIN52Q52LA3 116 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 LRRC8BQ6P9F7 803 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 FRMD7Q6ZUT3 714 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 IFNLR1Q8IU57 520 aaPredicted RBP21.64■■□□□ 1.06
COL18A1-207ENST00000473212 SLC2A14Q8TDB8 520 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 KBTBD7Q8WVZ9 684 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 FAM149B1Q96BN6 582 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 CMTM5Q96DZ9 223 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 P2RY11Q96G91 374 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 AGAP3Q96P47 875 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 SPATA16Q9BXB7 569 aa21.64■■□□□ 1.06
COL18A1-207ENST00000473212 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 KCNK1O00180 336 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 AMHP03971 560 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 MLNP12872 115 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 FDFT1P37268 417 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 MED21Q13503 144 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 OLFM3Q96PB7 478 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 MPHOSPH6Q99547 160 aaKnown RBP21.64■■□□□ 1.05
COL18A1-207ENST00000473212 MAN1C1Q9NR34 630 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 PPP2R3BQ9Y5P8 575 aa21.64■■□□□ 1.05
COL18A1-207ENST00000473212 DCXO43602 365 aa21.63■■□□□ 1.05
COL18A1-207ENST00000473212 CREB3O43889 395 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms