RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 PLK5Q496M5 336 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 C2CD6Q53TS8 623 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 HGSNATQ68CP4 663 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 TMEM110Q86TL2 294 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMC4-213ENST00000472282 TMEM25Q86YD3 366 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ETFBKMTQ8IXQ9 262 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ARHGAP18Q8N392 663 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ALLCQ8N6M5 410 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 FRMD1Q8N878 549 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 KIAA1958Q8N8K9 716 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 IL17RCQ8NAC3 791 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 MSANTD4Q8NCY6 345 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 MDGA1Q8NFP4 955 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 SLC30A5Q8TAD4 765 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 IRGQQ8WZA9 623 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 SYN2Q92777 582 aaPredicted RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 ACDQ96AP0 544 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 PIWIL1Q96J94 861 aaKnown RBP9.52□□□□□ -0.89
SMC4-213ENST00000472282 PNKPQ96T60 521 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 C11orf70Q9BRQ4 267 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 SYNCQ9H7C4 482 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 ENAMQ9NRM1 1142 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 MMP17Q9ULZ9 603 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 PI4KAP42356 2102 aa9.52□□□□□ -0.89
SMC4-213ENST00000472282 NYNRINQ9P2P1 1898 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 MUC22E2RYF6 1773 aaPredicted RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 A0A0A0MRY4 1105 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 PRR5-ARHGAP8B1AHC4 643 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 LRP3O75074 770 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ADAM23O75077 832 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 TULP3O75386 442 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 KLF8O95600 359 aaPredicted RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 ADCY5O95622 1261 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 SERPING1P05155 500 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 PLEKP08567 350 aaPredicted RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 UNGP13051 313 aaPredicted RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 GPC1P35052 558 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 NSFP46459 744 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 ARHGAP8P85298 464 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 CENPCQ03188 943 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 GAD2Q05329 585 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 EFEMP1Q12805 493 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 CRY1Q16526 586 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 C10orf120Q5SQS8 335 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 BSPRYQ5W0U4 402 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 OR6B2Q6IFH4 312 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 TCEAL6Q6IPX3 200 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ANO7Q6IWH7 933 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 OLFML1Q6UWY5 402 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 MMS22LQ6ZRQ5 1243 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 RSRC2Q7L4I2 434 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 RASSF3Q86WH2 238 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ERICH1Q86X53 443 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 TXNDC5Q8NBS9 432 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 EDEM1Q92611 657 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 TCEAL3Q969E4 200 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 EXOC4Q96A65 974 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 C18orf8Q96DM3 657 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ZC3H10Q96K80 434 aaKnown RBP9.51□□□□□ -0.89
SMC4-213ENST00000472282 DNAJC7Q99615 494 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 NACA2Q9H009 215 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ARHGEF4Q9NR80 690 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ABCC13Q9NSE7 274 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 TBC1D14Q9P2M4 693 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 EBF1Q9UH73 591 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 RASAL2Q9UJF2 1139 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 PCDHB9Q9Y5E1 797 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 DOCK4Q8N1I0 1966 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 CKAP5Q14008 2032 aa9.51□□□□□ -0.89
SMC4-213ENST00000472282 FRYLO94915 3013 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 CACNA1AO00555 2505 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 TMCO5BA8MYB1 307 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 AKR1B15C9JRZ8 316 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 GOLGA8SH3BPF8 625 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 DDX3XO00571 662 aaKnown RBP eCLIP9.5□□□□□ -0.894e-78■■■■■ 527.9
SMC4-213ENST00000472282 SLC30A4O14863 429 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 HOXC11O43248 304 aaPredicted RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 GRAP2O75791 330 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 APODP05090 189 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 HNRNPH3P31942 346 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 ATP5C1P36542 298 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 MPLP40238 635 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 EIF2DP41214 584 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 GABRB2P47870 512 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 SNX16P57768 344 aa9.5□□□□□ -0.89
SMC4-213ENST00000472282 MRPS21P82921 87 aaKnown RBP9.5□□□□□ -0.89
SMC4-213ENST00000472282 ANO4Q32M45 955 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms