RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 HIPK3Q9H422 1215 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 POLR1BQ9H9Y6 1135 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 VPS45Q9NRW7 570 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 TMEM216Q9P0N5 145 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 TXNDC16Q9P2K2 825 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 DAPK2Q9UIK4 370 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 NUB1Q9Y5A7 615 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 UBR3Q6ZT12 1888 aa9.77□□□□□ -0.85
NHLRC3-203ENST00000470258 A0A087WXM4 84 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 SLC15A5A6NIM6 579 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 C3orf70A6NLC5 250 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 A8MU76 341 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 TPST1O60507 370 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GLRA3O75311 464 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 ENTPD3O75355 529 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CLIC3O95833 236 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GNAO1P09471 354 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GRIA1P42261 906 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 SP4Q02446 784 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 TRPC3Q13507 836 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PTK2BQ14289 1009 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 UGCGQ16739 394 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CDO1Q16878 200 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 ZBED5Q49AG3 693 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PIGGQ5H8A4 983 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GALNT18Q6P9A2 607 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 KCNT2Q6UVM3 1135 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 UTS2BQ765I0 119 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 DPH6Q7L8W6 267 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CHST15Q7LFX5 561 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 HACE1Q8IYU2 909 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 SLC15A4Q8N697 577 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 TMEM102Q8N9M5 508 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 TDRD5Q8NAT2 981 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 WNK4Q96J92 1243 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 FAM96AQ9H5X1 160 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CORINQ9Y5Q5 1042 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GAKO14976 1311 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PRSS51A0A1B0GVH4 220 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RGSL1A5PLK6 1076 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 H3BMQ9 156 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GOLGA8TH3BQL2 631 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GSRP00390 522 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GRK2P25098 689 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RBL1P28749 1068 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 DPP6P42658 865 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 ABCG1P45844 678 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 LIG4P49917 911 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RALGDSQ12967 914 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GRAPQ13588 217 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 NIPAL1Q6NVV3 410 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CMC1Q7Z7K0 106 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CAND1Q86VP6 1230 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CCDC17Q96LX7 622 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 COG8Q96MW5 612 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CAMKK2Q96RR4 588 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 DHX33Q9H6R0 707 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 SLC8A2Q9UPR5 921 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CDY2AQ9Y6F7 541 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CDY1Q9Y6F8 540 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 AKAP10O43572 662 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 VAPBO95292 243 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 C1QAP02745 245 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 ALDOAP04075 364 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PRKCHP24723 683 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CLCN2P51788 898 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 NLRP11P59045 1033 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RC3H1Q5TC82 1133 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RWDD4Q6NW29 188 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 MAP4K3Q8IVH8 894 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CYGBQ8WWM9 190 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 AGAP3Q96P47 875 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 IMPG2Q9BZV3 1241 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 CCDC68Q9H2F9 335 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 RPF2Q9H7B2 306 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 PLAC1Q9HBJ0 212 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 KCNH7Q9NS40 1196 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 COPG2Q9UBF2 871 aa9.76□□□□□ -0.85
NHLRC3-203ENST00000470258 TRDMT1O14717 391 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 CHADO15335 359 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 TIPRLO75663 272 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 ESRRBO95718 433 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 MAPTP10636 758 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 JAK1P23458 1154 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 MPSTP25325 297 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 PTPN7P35236 360 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 TCF7P36402 384 aaPredicted RBP9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 SERPINB9P50453 376 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 SLC25A11Q02978 314 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 SCYL2Q6P3W7 929 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 LAYNQ6UX15 382 aa9.75□□□□□ -0.85
NHLRC3-203ENST00000470258 CARM1Q86X55 608 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms