RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
LIMS2-213ENST00000469300 OR9Q1Q8NGQ5 310 aa15.41■□□□□ 0.06
LIMS2-213ENST00000469300 ZYG11BQ9C0D3 744 aa15.41■□□□□ 0.06
LIMS2-213ENST00000469300 KCND1Q9NSA2 647 aa15.41■□□□□ 0.06
LIMS2-213ENST00000469300 TSC22D4Q9Y3Q8 395 aa15.41■□□□□ 0.06
LIMS2-213ENST00000469300 H3BQF6 201 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TRIM16O95361 564 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 FBXW4P57775 412 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TGM3Q08188 693 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TP53BP2Q13625 1128 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 POU6F1Q14863 301 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 HJURPQ8NCD3 748 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 OSCP1Q8WVF1 389 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 ERP27Q96DN0 273 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 HIC2Q96JB3 615 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TAS2R13Q9NYV9 303 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 COL20A1Q9P218 1284 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 SPASTQ9UBP0 616 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 RWDD3Q9Y3V2 267 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 A0A0A0MRY4 1105 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 H3BMM5 538 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 MAP3K13O43283 966 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 ELK3P41970 407 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 ZC3H12AQ5D1E8 599 aaKnown RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 PATL1Q86TB9 770 aaKnown RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CCDC33Q8N5R6 958 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 SEC16BQ96JE7 1060 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TBL1YQ9BQ87 522 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TMBIM4Q9HC24 238 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 Q9Y3F1 56 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 ARHGEF9O43307 516 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CES1P23141 567 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 PTPN3P26045 913 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 GLUD2P49448 558 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 IRAK1P51617 712 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CYLC2Q14093 348 aaPredicted RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 KIAA2013Q8IYS2 634 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 UBP1Q9NZI7 540 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CTNNAL1Q9UBT7 734 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TLL1O43897 1013 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 GJB1P08034 283 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CPA3P15088 417 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 CSE1LP55060 971 aaKnown RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 SNRPD1P62314 119 aaKnown RBP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 PPIGQ13427 754 aaKnown RBP eCLIP15.4■□□□□ 0.06
LIMS2-213ENST00000469300 ZNF384Q8TF68 577 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 MAGEB18Q96M61 343 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 DNPEPQ9ULA0 475 aa15.4■□□□□ 0.06
LIMS2-213ENST00000469300 TREHO43280 583 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 SNUPNO95149 360 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 SMPD1P17405 629 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 SKOR1P84550 965 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 SGO1Q5FBB7 561 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 NAIF1Q69YI7 327 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 USP45Q70EL2 814 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 ICA1LQ8NDH6 482 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 EPS8L3Q8TE67 593 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 TMEM159Q96B96 161 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 ZBTB10Q96DT7 871 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 CPNE1Q99829 537 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 RPN2P04844 631 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 OR56A5P0C7T3 313 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 ALOX15P16050 662 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 HPCAP84074 193 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 PPP1R15BQ5SWA1 713 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 BBS12Q6ZW61 710 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 KCNMB4Q86W47 210 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 TUBGCP3Q96CW5 907 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 RNF157Q96PX1 679 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 IL22Q9GZX6 179 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 AFDNP55196 1824 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 HNRNPRO43390 633 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 LCLAT1Q6UWP7 414 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 PTAR1Q7Z6K3 402 aaPredicted RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 NAF1Q96HR8 494 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 PPP1R36Q96LQ0 422 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 SNRNP25Q9BV90 132 aaKnown RBP15.39■□□□□ 0.05
LIMS2-213ENST00000469300 YIPF2Q9BWQ6 316 aa15.39■□□□□ 0.05
LIMS2-213ENST00000469300 DUOX1Q9NRD9 1551 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 FAM95CA0A1B0GW59 222 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 E2F8A0AVK6 867 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 CHADO15335 359 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 PECAM1P16284 738 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-213ENST00000469300 CYP2A7P20853 494 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 DNAJC3Q13217 504 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 STRADAQ7RTN6 431 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 PSTKQ8IV42 348 aaKnown RBP15.38■□□□□ 0.05
LIMS2-213ENST00000469300 PHACTR4Q8IZ21 702 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 ELMO3Q96BJ8 720 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 NTPCRQ9BSD7 190 aaKnown RBP15.38■□□□□ 0.05
LIMS2-213ENST00000469300 GLUD1P00367 558 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 CYP1A1P04798 512 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-213ENST00000469300 ATP4AP20648 1035 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 DPYSL3Q14195 570 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 KCTD19Q17RG1 926 aaPredicted RBP15.38■□□□□ 0.05
LIMS2-213ENST00000469300 CCDC153Q494R4 210 aa15.38■□□□□ 0.05
LIMS2-213ENST00000469300 LNX1Q8TBB1 728 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms