RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KCNJ12Q14500 433 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 E2F5Q15329 346 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 TEAD4Q15561 434 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 CNGA2Q16280 664 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 C9orf64Q5T6V5 341 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SYPL2Q5VXT5 272 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 ZNF776Q68DI1 518 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 DHRS13Q6UX07 377 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 PDZD3Q86UT5 571 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 MMAAQ8IVH4 418 aaKnown RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 UNC45BQ8IWX7 931 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SCML4Q8N228 414 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 PPM1KQ8N3J5 372 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 ENGASEQ8NFI3 743 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 FIBINQ8TAL6 211 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 TTC17Q96AE7 1141 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 FCRL2Q96LA5 508 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 PCED1AQ9H1Q7 454 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-204ENST00000469207 SGK2Q9HBY8 427 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 KIAA1257Q9ULG3 409 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 LOC400499M0QZD8 3231 aa12.73□□□□□ -0.37
HDAC3-204ENST00000469207 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 MOCS2O96007 188 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 PAEPP09466 180 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 TBXAS1P24557 533 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 GRIA4P48058 902 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ZNF445P59923 1031 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 HNRNPA1L2Q32P51 320 aaKnown RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 DCAF6Q58WW2 860 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 MS4A13Q5J8X5 152 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 NCEH1Q6PIU2 408 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ADAT2Q7Z6V5 191 aaKnown RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 DQX1Q8TE96 717 aaKnown RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 IRGQQ8WZA9 623 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 IGSF8Q969P0 613 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 SLC39A13Q96H72 371 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 LRIG1Q96JA1 1093 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 NT5C1BQ96P26 610 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 GSDMAQ96QA5 445 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 FAM129BQ96TA1 746 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 CDC6Q99741 560 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 PABPC3Q9H361 631 aaKnown RBP12.72□□□□□ -0.37
HDAC3-204ENST00000469207 OSGEPQ9NPF4 335 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ACP6Q9NPH0 428 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 RMND1Q9NWS8 449 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 NCKAP1Q9Y2A7 1128 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ITPR1Q14643 2758 aa12.72□□□□□ -0.37
HDAC3-204ENST00000469207 ANKRD11Q6UB99 2663 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 A0A1W2PPC4 97 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 PLK4O00444 970 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 TNFSF14O43557 240 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 RNASEH2AO75792 299 aaKnown RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 VAV1P15498 845 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 SLC8A1P32418 973 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 METAP1P53582 386 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 ST8SIA6P61647 398 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 DNAJC3Q13217 504 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 SHBQ15464 509 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 CST6Q15828 149 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 ZC3H12AQ5D1E8 599 aaKnown RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 MPP7Q5T2T1 576 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 RAP1GAP2Q684P5 730 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 DENND1BQ6P3S1 775 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 LGI2Q8N0V4 545 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 STK40Q8N2I9 435 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 AADATQ8N5Z0 425 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 HJURPQ8NCD3 748 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-204ENST00000469207 SPATA20Q8TB22 786 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 AZIN2Q96A70 460 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 KREMEN1Q96MU8 473 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 CYTH4Q9UIA0 394 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 PLXNA2O75051 1894 aa12.71□□□□□ -0.37
HDAC3-204ENST00000469207 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
HDAC3-204ENST00000469207 A0A1B0GTQ1 180 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 IRAK2O43187 625 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 PCDHGA12O60330 932 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 BMP6P22004 513 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 GRK6P43250 576 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 GPD2P43304 727 aa12.7□□□□□ -0.38
HDAC3-204ENST00000469207 PSMD8P48556 350 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms