RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 BLVRAP53004 296 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 AQP4P55087 323 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 P2RX3P56373 397 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 LMNB2Q03252 620 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ZNF211Q13398 564 aaPredicted RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 MFSD10Q14728 455 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 LPCAT4Q643R3 524 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ZNF600Q6ZNG1 722 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SV2AQ7L0J3 742 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 ARHGEF19Q8IW93 802 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 GPD1LQ8N335 351 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 SLC25A41Q8N5S1 370 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 RMDN1Q96DB5 314 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 FERMT1Q9BQL6 677 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 HERC2P3Q9BVR0 1158 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 TRPV6Q9H1D0 765 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 TP63Q9H3D4 680 aaPredicted RBP10.2□□□□□ -0.78
NUP50-214ENST00000469163 C12orf10Q9HB07 376 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
NUP50-214ENST00000469163 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 SPOPO43791 374 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 TNNC2P02585 160 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 DBTP11182 482 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 CREB1P16220 341 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 CDH2P19022 906 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 PHC1P78364 1004 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MAPK7Q13164 816 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 NCOA4Q13772 614 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MTFR1Q15390 333 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 KCNA10Q16322 511 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 SCYL2Q6P3W7 929 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 ZNF410Q86VK4 478 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 CADM3Q8N126 398 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 HEXIM2Q96MH2 286 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 GLT1D1Q96MS3 346 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 DNAJC7Q99615 494 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 C11orf70Q9BRQ4 267 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 HEMGNQ9BXL5 484 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 ZNF717Q9BY31 904 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 WASH6PQ9NQA3 447 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 HPS4Q9NQG7 708 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 NKIRAS1Q9NYS0 192 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 STMN3Q9NZ72 180 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 KCNN3Q9UGI6 736 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 LIMA1Q9UHB6 759 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 NR2E3Q9Y5X4 410 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 FRMPD4Q14CM0 1322 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 KRT7P08729 469 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 JAK1P23458 1154 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 ACAT1P24752 427 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 PGM1P36871 562 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 NR4A2P43354 598 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MARSP56192 900 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 GNG2P59768 71 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MYL6P60660 151 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 CACNB2Q08289 660 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 ORC2Q13416 577 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 SMAD1Q15797 465 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 CARTPTQ16568 116 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MIIPQ5JXC2 388 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 KLHDC7AQ5VTJ3 777 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 BTBD8Q5XKL5 378 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 OTOP3Q7RTS5 596 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 ZNF296Q8WUU4 475 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 CRYGNQ8WXF5 182 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 SLC35C1Q96A29 364 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 BTBD10Q9BSF8 475 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 TRIM39Q9HCM9 518 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 MRPL40Q9NQ50 206 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 NCKIPSDQ9NZQ3 722 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 A0A087X0T9 212 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 GOLGA8QA0A0J9YX86 632 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 GOLGA8OA6NCC3 632 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 NT5C1B-RDH14C9J2C7 533 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 F5H423 210 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 GOLGA8NF8WBI6 632 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 GOLGA8RI6L899 631 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 XPO1O14980 1071 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 HDAC3O15379 428 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 GSC2O15499 205 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 FAM228BP0C875 321 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 SMIM18P0DKX4 95 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 PRKCAP17252 672 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 PON1P27169 355 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 PTPN9P43378 593 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 RPS3AP61247 264 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 ZBTB16Q05516 673 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 NFE2Q16621 373 aaPredicted RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 SFT2D3Q587I9 215 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 UBE2UQ5VVX9 321 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 ALKBH5Q6P6C2 394 aaKnown RBP10.19□□□□□ -0.78
NUP50-214ENST00000469163 XKR5Q6UX68 686 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 SLC47A2Q86VL8 602 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 LURAP1LQ8IV03 231 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 UBA3Q8TBC4 463 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 GCNAQ96QF7 691 aa10.19□□□□□ -0.78
NUP50-214ENST00000469163 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms