RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SHOC2Q9UQ13 582 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 HBS1LQ9Y450 684 aaKnown RBP21.18■□□□□ 0.98
TMEM53-207ENST00000468117 PDE4DIPQ5VU43 2346 aa21.18■□□□□ 0.98
TMEM53-207ENST00000468117 TCRBV7S3A2A0A539 114 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 H3BQF6 201 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 GOLGA8MH3BSY2 632 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 FGF10O15520 208 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-207ENST00000468117 C8AP07357 584 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 CA3P07451 260 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 KPNA1P52294 538 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-207ENST00000468117 GAD2Q05329 585 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 SYCP2LQ5T4T6 812 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 ITIH5Q86UX2 942 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 KRT222Q8N1A0 295 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 NAT8LQ8N9F0 302 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 KREMEN2Q8NCW0 462 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 MICAL1Q8TDZ2 1067 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 KLC2Q9H0B6 622 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 RNF38Q9H0F5 515 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 PABPC3Q9H361 631 aaKnown RBP21.17■□□□□ 0.98
TMEM53-207ENST00000468117 RAB6BQ9NRW1 208 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 NDFIP2Q9NV92 336 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 UXTQ9UBK9 157 aaPredicted RBP21.17■□□□□ 0.98
TMEM53-207ENST00000468117 RAD54BQ9Y620 910 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 NYNRINQ9P2P1 1898 aaKnown RBP21.17■□□□□ 0.98
TMEM53-207ENST00000468117 GCATO75600 419 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 GPS2Q13227 327 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 SHHQ15465 462 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 FAXCQ5TGI0 409 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 RAP1GAP2Q684P5 730 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 NUGGCQ68CJ6 796 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 KLHDC10Q6PID8 442 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 ZNF683Q8IZ20 524 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 OR2W6PQ8NHA6 318 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 DEPDC1BQ8WUY9 529 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 CEP41Q9BYV8 373 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 TSPYL1Q9H0U9 437 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 SEPT10Q9P0V9 454 aa21.17■□□□□ 0.98
TMEM53-207ENST00000468117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 C5orf60A6NFR6 353 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 C5orf67F2Z3F1 127 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GRM6O15303 877 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 NCAM2O15394 837 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GLUD1P00367 558 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 LRG1P02750 347 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 MAGEA10P43363 369 aaPredicted RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 IRAK1P51617 712 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GALNT2Q10471 571 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 RBM15Q96T37 977 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 RUFY1Q96T51 708 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 CDC42EP4Q9H3Q1 356 aaKnown RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 IL21Q9HBE4 155 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 NDC80O14777 642 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 TMEM63AO94886 807 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 SYF2O95926 243 aaKnown RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 OAS1P00973 400 aaKnown RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 F11P03951 625 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 IRS1P35568 1242 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GARSP41250 739 aaKnown RBP21.16■□□□□ 0.98
TMEM53-207ENST00000468117 PPP3CCP48454 512 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 CAMK1Q14012 370 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 CCDC149Q6ZUS6 474 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GKN1Q9NS71 199 aa21.16■□□□□ 0.98
TMEM53-207ENST00000468117 GOLGA6L7A0A1B0GV03 622 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 H0YGN5 161 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 KCNK1O00180 336 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 RNF103O00237 685 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 METTL18O95568 372 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 MX2P20592 715 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 PPIDQ08752 370 aaKnown RBP21.15■□□□□ 0.98
TMEM53-207ENST00000468117 SPDYCQ5MJ68 293 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 ANKRD20A2Q5SQ80 823 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 ANKRD20A1Q5TYW2 823 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 ANKRD20A3Q5VUR7 823 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 NADSYN1Q6IA69 706 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 FBXL22Q6P050 247 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 LRRC31Q6UY01 552 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 HOOK3Q86VS8 718 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 RTL3Q8N8U3 475 aaKnown RBP21.15■□□□□ 0.98
TMEM53-207ENST00000468117 HDAC11Q96DB2 347 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 PRMT1Q99873 361 aaKnown RBP21.15■□□□□ 0.98
TMEM53-207ENST00000468117 ASB3Q9Y575 518 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 NFS1Q9Y697 457 aa21.15■□□□□ 0.98
TMEM53-207ENST00000468117 UBE3AQ05086 875 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 WASHC5Q12768 1159 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 SLC29A2Q14542 456 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 KCNJ11Q14654 390 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 ARHGEF18Q6ZSZ5 1173 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 TFAP2DQ7Z6R9 452 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 ARHGAP12Q8IWW6 846 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 IGSF8Q969P0 613 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 CYP2S1Q96SQ9 504 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 FERMT1Q9BQL6 677 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 FOXP3Q9BZS1 431 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 ETNK1Q9HBU6 452 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 TRPC7Q9HCX4 862 aa21.14■□□□□ 0.98
TMEM53-207ENST00000468117 A0A0A0MRY4 1105 aa21.14■□□□□ 0.97
TMEM53-207ENST00000468117 DFFAO00273 331 aa21.14■□□□□ 0.97
TMEM53-207ENST00000468117 RIPK2O43353 540 aa21.14■□□□□ 0.97
TMEM53-207ENST00000468117 CNTN5O94779 1100 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms